RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ITPR1Q14643 2758 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 ZC3H12DA2A288 527 aaKnown RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 OR2M5A3KFT3 312 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 ELOA3DA6NLF2 546 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 CASQ2O14958 399 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 HPNP05981 417 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 ZNF23P17027 643 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 EGR4Q05215 589 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 ELOA3BQ3SY89 546 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 SWT1Q5T5J6 900 aaKnown RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 ZNF770Q6IQ21 691 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 PRICKLE2Q7Z3G6 844 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 GTPBP8Q8N3Z3 284 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 ELOA3Q8NG57 546 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 TMEM239Q8WW34 195 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 ACOT11Q8WXI4 607 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 ZBTB8AQ96BR9 441 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 MPP4Q96JB8 637 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 SLC29A1Q99808 456 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 C12orf10Q9HB07 376 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 MEPEQ9NQ76 525 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 SELENONQ9NZV5 590 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 PDP1Q9P0J1 537 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 STOML1Q9UBI4 398 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 MRPS18CQ9Y3D5 142 aaKnown RBP17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 LIPGQ9Y5X9 500 aa17.17■□□□□ 0.34
CHMP4A-201ENST00000347519 C7orf72A4D263 438 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 KPNA4O00629 521 aaPredicted RBP17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 SOCS2O14508 198 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 SUSD5O60279 629 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 CCNB2O95067 398 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 OPN1LWP04000 364 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 PNMTP11086 282 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 CXCR1P25024 350 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 SHC1P29353 583 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 LRRC36Q1X8D7 754 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 MICAQ29983 383 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 C1QL3Q5VWW1 255 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 RAET1LQ5VY80 246 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 PCSK4Q6UW60 755 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 ZNF730Q6ZMV8 503 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 STK32CQ86UX6 486 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 Q8NA96 180 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 ATP6V1C2Q8NEY4 427 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 OR10G2Q8NGC3 310 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 OR4K5Q8NGD3 323 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 OR14L1PQ8NHC6 308 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 GIPC3Q8TF64 312 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 DNAJA3Q96EY1 480 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 OR11A1Q9GZK7 315 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 DEFB127Q9H1M4 99 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 SLC6A15Q9H2J7 730 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 COQ10BQ9H8M1 238 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 SMURF2Q9HAU4 748 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 C20orf141Q9NUB4 165 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 B4GALT7Q9UBV7 327 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 PRDM4Q9UKN5 801 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 TMCC3Q9ULS5 477 aa17.16■□□□□ 0.34
CHMP4A-201ENST00000347519 G3V2T6 193 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 RASAL1O95294 804 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 APOBEC1P41238 236 aaKnown RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 HTR3AP46098 478 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 GLYR1Q49A26 553 aaPredicted RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 OTUD3Q5T2D3 398 aaPredicted RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 OGFRL1Q5TC84 451 aaPredicted RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 PGBD2Q6P3X8 592 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 TTC33Q6PID6 262 aaPredicted RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 MBOAT2Q6ZWT7 520 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 ZER1Q7Z7L7 766 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 SLC22A16Q86VW1 577 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 NRMQ8IXM6 262 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 SVOPLQ8N434 492 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 FAM109AQ8N4B1 249 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 FAM98AQ8NCA5 519 aaKnown RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 NRBF2Q96F24 287 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 GPA33Q99795 319 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 TSPAN10Q9H1Z9 355 aaPredicted RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 TMEM185BQ9H7F4 350 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 ZDHHC11Q9H8X9 412 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 SLC6A5Q9Y345 797 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 ZNF337Q9Y3M9 751 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 LRRN3E7EW58 273 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 GASTP01350 101 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 PEPDP12955 493 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 ZNF17P17021 662 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 CBLP22681 906 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 ADH6P28332 368 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 EIF1P41567 113 aaKnown RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 RBM34P42696 430 aaKnown RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 CMPK2Q5EBM0 449 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 RPUSD3Q6P087 351 aaKnown RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 TRILQ7L0X0 811 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 HIPK1Q86Z02 1210 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 CBR4Q8N4T8 237 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 PNPLA2Q96AD5 504 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 KTI12Q96EK9 354 aaPredicted RBP17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 FEVQ99581 238 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 TMEM43Q9BTV4 400 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 GABARAPL1Q9H0R8 117 aa17.15■□□□□ 0.34
CHMP4A-201ENST00000347519 CHRNA9Q9UGM1 479 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms