RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 THBS1P07996 1170 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 NCF2P19878 526 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-201ENST00000344376 CRYGSP22914 178 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 SLC1A3P43003 542 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 MAP2K6P52564 334 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 IST1P53990 364 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 COPZ1P61923 177 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 EPS8Q12929 822 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 RPS26P11Q5JNZ5 115 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-201ENST00000344376 RNF220Q5VTB9 566 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 PAMR1Q6UXH9 720 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 ZNF836Q6ZNA1 936 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 ZNF550Q7Z398 422 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 VRK2Q86Y07 508 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 BBS10Q8TAM1 723 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 DDIT4LQ96D03 193 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 THOC1Q96FV9 657 aaKnown RBP14.31□□□□□ -0.12
ATG4B-201ENST00000344376 ZC3HAV1LQ96H79 300 aaKnown RBP14.31□□□□□ -0.12
ATG4B-201ENST00000344376 PSD2Q9BQI7 771 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 NPHS2Q9NP85 383 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 EMC3Q9P0I2 261 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-201ENST00000344376 DCTN4Q9UJW0 460 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 PLEKHA6Q9Y2H5 1048 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 GPR52Q9Y2T5 361 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 TMED7-TICAM2A0A0A6YYA0 188 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 SMAD9O15198 467 aaKnown RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 DNPH1O43598 174 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 ADAM11O75078 769 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 PMS2P2O95744 297 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 BMP2P12643 396 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 CCNA2P20248 432 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 TESK1Q15569 626 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 GCNT6Q5T4J0 391 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 ANKRD34AQ69YU3 496 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 TFAP2EQ6VUC0 442 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 STAC2Q6ZMT1 411 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 NUFIP2Q7Z417 695 aaKnown RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 ADGRG3Q86Y34 549 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 OR10A4Q9H209 315 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 LIME1Q9H400 295 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 BCL2L10Q9HD36 194 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 CCM2LQ9NUG4 571 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 RLIMQ9NVW2 624 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 C6orf203Q9P0P8 240 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 TMED7Q9Y3B3 224 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 AKAP9Q99996 3911 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 SPG11Q96JI7 2443 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 A0A0G2JND7 137 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 A0A1W2PP18 115 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 ZNF724A8MTY0 619 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 EVPLLA8MZ36 301 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 ZNF208O43345 1280 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 RAF1P04049 648 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 HOXB9P17482 250 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 PSMB1P20618 241 aaKnown RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 TACR3P29371 465 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 KEAP1Q14145 624 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 ZNF311Q5JNZ3 666 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 SPNS3Q6ZMD2 512 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 MTDHQ86UE4 582 aaKnown RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 STEAP2Q8NFT2 490 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 PIGXQ8TBF5 258 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 PIK3IP1Q96FE7 263 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 FOXC2Q99958 501 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 SPATA9Q9BWV2 254 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 HDHD5Q9BXW7 423 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 OR11A1Q9GZK7 315 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 ACTR6Q9GZN1 396 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 PLEKHF2Q9H8W4 249 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 SLC25A37Q9NYZ2 338 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 TMEM181Q9P2C4 612 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 LEF1Q9UJU2 399 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-201ENST00000344376 OSGIN1Q9UJX0 560 aa14.3□□□□□ -0.12
ATG4B-201ENST00000344376 DEFB108AA8MXU0 73 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 ANGPT2O15123 496 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-201ENST00000344376 NUDT7P0C024 238 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 GKN3PP0CG01 181 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 IL32P24001 234 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 CXCR1P25024 350 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 OR2B6P58173 313 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 PAGE3Q5JUK9 113 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 ABLIM2Q6H8Q1 611 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 WBP2NLQ6ICG8 309 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 GALNT5Q7Z7M9 940 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 MSRB3Q8IXL7 192 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 CADM2Q8N3J6 435 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 MAL2Q969L2 176 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 ARL5BQ96KC2 179 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 SLAMF8Q9P0V8 285 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 TRAPPC4Q9Y296 219 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 HEATR5AQ86XA9 2040 aa14.29□□□□□ -0.12
ATG4B-201ENST00000344376 TMEM72A0PK05 275 aa14.28□□□□□ -0.12
ATG4B-201ENST00000344376 EIF1BO60739 113 aaKnown RBP14.28□□□□□ -0.12
ATG4B-201ENST00000344376 TROVE2P10155 538 aaKnown RBP eCLIP14.28□□□□□ -0.124e-6■□□□□ 9.4
ATG4B-201ENST00000344376 OR3A2P47893 321 aa14.28□□□□□ -0.12
ATG4B-201ENST00000344376 GYS2P54840 703 aa14.28□□□□□ -0.12
ATG4B-201ENST00000344376 SLC35A1P78382 337 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms