RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 HNRNPCL4P0DMR1 293 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 ETFAP13804 333 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 ENPP1P22413 925 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 CRYGSP22914 178 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 CCKARP32238 428 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 SQLEQ14534 574 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 LARS2Q15031 903 aaKnown RBP11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 LRIF1Q5T3J3 769 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 RNF220Q5VTB9 566 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 PAMR1Q6UXH9 720 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 TMPPEQ6ZT21 453 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 ABHD3Q8WU67 409 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC38A5Q8WUX1 472 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 ROBO4Q8WZ75 1007 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF524Q96C55 264 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 SPDL1Q96EA4 605 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 WFIKKN1Q96NZ8 548 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 OR5B2Q96R09 309 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 FOXC2Q99958 501 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 EBF4Q9BQW3 602 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 HDHD5Q9BXW7 423 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 PAIP1Q9H074 479 aaKnown RBP11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 CLEC4AQ9UMR7 237 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF232Q9UNY5 417 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 TRIM33Q9UPN9 1127 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 CORO2BQ9UQ03 480 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 GPR52Q9Y2T5 361 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 IFT52Q9Y366 437 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 PCDHB14Q9Y5E9 798 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 GMEB1Q9Y692 573 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 MPDZO75970 2070 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CDHR4A6H8M9 788 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CFAP73A6NFT4 308 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF724A8MTY0 619 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CLIC1O00299 241 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CYTIPO60759 359 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 PMS2P2O95744 297 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 C1QCP02747 245 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 BCHEP06276 602 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 BMP2P12643 396 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 PSMB1P20618 241 aaKnown RBP11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 RYKP34925 604 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC1A3P43003 542 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 IDH2P48735 452 aaKnown RBP11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 DIO1P49895 249 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 POLR2HP52434 150 aaKnown RBP11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 ART1P52961 327 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 PDK3Q15120 406 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 RGNQ15493 299 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 EXOC3L2Q2M3D2 409 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 MRPL2Q5T653 305 aaKnown RBP11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 FUNDC1Q8IVP5 155 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 OR52P1PQ8NH57 321 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CNOT9Q92600 299 aaKnown RBP11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC35B4Q969S0 331 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 MBD6Q96DN6 1003 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 KLHL4Q9C0H6 718 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CXXC4Q9H2H0 198 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 BCL2L10Q9HD36 194 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 A4GALTQ9NPC4 353 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CTPS2Q9NRF8 586 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 KLHL28Q9NXS3 571 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 CCDC167Q9P0B6 97 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 EMC3Q9P0I2 261 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 TRAPPC4Q9Y296 219 aa11.88□□□□□ -0.51
SIRPB3P-201ENST00000340424 A0A1W2PNR3 127 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 CLDN24A6NM45 220 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 SULT2B1O00204 365 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 NR5A2O00482 541 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 SMAD9O15198 467 aaKnown RBP11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 BCAS1O75363 584 aaPredicted RBP11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 CNOT4O95628 575 aaKnown RBP11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 RAF1P04049 648 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 HOXB9P17482 250 aaPredicted RBP11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 IST1P53990 364 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 COPZ1P61923 177 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 PLAURQ03405 335 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 RASGEF1BQ0VAM2 473 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 EPS8Q12929 822 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 P2RY6Q15077 328 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 MAPK11Q15759 364 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC2A7Q6PXP3 512 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 TFAP2EQ6VUC0 442 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 SSX8Q7RTT4 187 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF550Q7Z398 422 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 MTDHQ86UE4 582 aaKnown RBP11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 ADGRG3Q86Y34 549 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 TUSC5Q8IXB3 177 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 STEAP2Q8NFT2 490 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 BBS10Q8TAM1 723 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 DDIT4LQ96D03 193 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 AURKBQ96GD4 344 aaPredicted RBP11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 TMEM19Q96HH6 336 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 ALPK1Q96QP1 1244 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 PSD2Q9BQI7 771 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 PLEKHF2Q9H8W4 249 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms