RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 FGF20Q9NP95 211 aaPredicted RBP18.42■□□□□ 0.54
SUMO3-201ENST00000332859 EXOSC3Q9NQT5 275 aaKnown RBP18.42■□□□□ 0.54
SUMO3-201ENST00000332859 RPS6KB2Q9UBS0 482 aa18.42■□□□□ 0.54
SUMO3-201ENST00000332859 IGHV1-45A0A0A0MS14 117 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 LOC100506127A0A0U1RQW1 187 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 A0A1B0GWA3 101 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 A0A1W2PQD3 144 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 OR6C70A6NIJ9 312 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 KDM4EB2RXH2 506 aaPredicted RBP18.41■□□□□ 0.54
SUMO3-201ENST00000332859 GTPBP1O00178 669 aaKnown RBP18.41■□□□□ 0.54
SUMO3-201ENST00000332859 MYL12BO14950 172 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 CHP2O43745 196 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 ADAM11O75078 769 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 RAB40ALP0C0E4 278 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 RAB40BQ12829 278 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 EFR3AQ14156 821 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 CD226Q15762 336 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 C3orf38Q5JPI3 329 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 GDPGP1Q6ZNW5 385 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 BCDIN3DQ7Z5W3 292 aaKnown RBP18.41■□□□□ 0.54
SUMO3-201ENST00000332859 MFSD4AQ8N468 514 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 OR52I1Q8NGK6 324 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 GRHL3Q8TE85 626 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 CHCHD6Q9BRQ6 235 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 NPFFR2Q9Y5X5 522 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 CDH10Q9Y6N8 788 aa18.41■□□□□ 0.54
SUMO3-201ENST00000332859 A0A1W2PNU3 283 aaPredicted RBP18.4■□□□□ 0.54
SUMO3-201ENST00000332859 ANKRD33BA6NCL7 494 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 ZNF264O43296 627 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 PPM1BO75688 479 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 NTN1O95631 604 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 COPZ1P61923 177 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 MLLT11Q13015 90 aaPredicted RBP18.4■□□□□ 0.54
SUMO3-201ENST00000332859 SSX1Q16384 188 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 EXT1Q16394 746 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 APOOLQ6UXV4 268 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 ZNF620Q6ZNG0 422 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 TIPARPQ7Z3E1 657 aaKnown RBP18.4■□□□□ 0.54
SUMO3-201ENST00000332859 CADM2Q8N3J6 435 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 CHPT1Q8WUD6 406 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 CT55Q8WUE5 264 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 TMEM239Q8WW34 195 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 ARSGQ96EG1 525 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 HS6ST2Q96MM7 605 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 SPRY4Q9C004 299 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 FAIMQ9NVQ4 179 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 HS3ST3B1Q9Y662 390 aa18.4■□□□□ 0.54
SUMO3-201ENST00000332859 ALG1L2C9J202 215 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 PIP5K1CO60331 668 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 SULT1C4O75897 302 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 BMP4P12644 408 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 SKP2Q13309 424 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 INAQ16352 499 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 RGS21Q2M5E4 152 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 BTBD16Q32M84 506 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 ULK3Q6PHR2 472 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 WDR88Q6ZMY6 472 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 MEX3DQ86XN8 651 aaKnown RBP18.39■□□□□ 0.54
SUMO3-201ENST00000332859 THAP3Q8WTV1 239 aaPredicted RBP18.39■□□□□ 0.54
SUMO3-201ENST00000332859 RFKQ969G6 155 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 CENPOQ9BU64 300 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 TBL1XR1Q9BZK7 514 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 HHATLQ9HCP6 504 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 SEC14L4Q9UDX3 406 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 CLEC2DQ9UHP7 191 aa18.39■□□□□ 0.54
SUMO3-201ENST00000332859 hCG_2014768A0A024R1R8 64 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 HMGN1P05114 100 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 COX6A1P12074 109 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 NAGAP17050 411 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 TCN2P20062 427 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 GPR4P46093 362 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 ITGADQ13349 1161 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 PGGHGQ32M88 737 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 ALG10BQ5I7T1 473 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 DESI1Q6ICB0 168 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 TUBA3EQ6PEY2 450 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 ESX1Q8N693 406 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 ANKK1Q8NFD2 765 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 OR9Q1Q8NGQ5 310 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 ELP5Q8TE02 316 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 PPP1R14BQ96C90 147 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 COX4I2Q96KJ9 171 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 DEFB126Q9BYW3 111 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 LAT2Q9GZY6 243 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 FOXJ2Q9P0K8 574 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 CARD8Q9Y2G2 431 aa18.39■□□□□ 0.53
SUMO3-201ENST00000332859 TMEM200CA6NKL6 621 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 WWP2O00308 870 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 SURF4O15260 269 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 NDUFB5O43674 189 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 PFDN1O60925 122 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 DKK1O94907 266 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 MYL12AP19105 171 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 RBM34P42696 430 aaKnown RBP18.38■□□□□ 0.53
SUMO3-201ENST00000332859 GAS1P54826 345 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 KIRREL2Q6UWL6 708 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 C16orf47Q6ZP98 133 aaPredicted RBP18.38■□□□□ 0.53
SUMO3-201ENST00000332859 DCDC5Q6ZRR9 648 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 OR4Q3Q8NH05 313 aa18.38■□□□□ 0.53
SUMO3-201ENST00000332859 BRIX1Q8TDN6 353 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms