RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CAB39Q9Y376 341 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 SF3B6Q9Y3B4 125 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 ARID1BQ8NFD5 2236 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 C2orf92A0A1B0GVN3 265 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 A0A1B0GX78 115 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 FUOMA2VDF0 154 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 SLC22A31A6NKX4 558 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 TTC36A6NLP5 189 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 GTPBP1O00178 669 aaKnown RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 SCDO00767 359 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 IGKV3-11P04433 115 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 CLEC2LP0C7M8 214 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 ZNF3P17036 446 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 SLC6A6P31641 620 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 GABRA5P31644 462 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 TNFSF8P32971 234 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 PLA2G5P39877 138 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 FHL1Q13642 323 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 INSL4Q14641 139 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 ELAVL1Q15717 326 aaKnown RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 GXYLT1Q4G148 440 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 LYSMD4Q5XG99 296 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 FAAH2Q6GMR7 532 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 ZNF322Q6U7Q0 402 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 ZNF527Q8NB42 609 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 OR52E2Q8NGJ4 325 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 OR5M3Q8NGP4 307 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 OR4K13Q8NH42 304 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 ZNF721Q8TF20 911 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 SLC35B4Q969S0 331 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 C3orf49Q96BT1 292 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 ZNF501Q96CX3 271 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 SLC7A5P2Q9GIP4 190 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 ISYNA1Q9NPH2 558 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 CRNNQ9UBG3 495 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 ADAM18Q9Y3Q7 739 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 CFAP54Q96N23 3096 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 MN1Q10571 1320 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 DMDP11532 3685 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 RP1P56715 2156 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 A0A075B6Q4 140 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 DAPL1A0PJW8 107 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 SAGE2PA6NJ88 616 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 J3QRE1 110 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 OIP5O43482 229 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 UTS2O95399 124 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 IL33O95760 270 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 DDAH2O95865 285 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 MSL3P1P0C860 447 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 UBL4AP11441 157 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 HK1P19367 917 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 RPL4P36578 427 aaKnown RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 STEAP3Q658P3 488 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 WDR74Q6RFH5 385 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 PLEKHG7Q6ZR37 379 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 TMPRSS9Q7Z410 1059 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 SLC22A16Q86VW1 577 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 LYSMD2Q8IV50 215 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 GHDCQ8N2G8 530 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 TMEM99Q8N816 258 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 FAM83FQ8NEG4 500 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 KISS1RQ969F8 398 aaPredicted RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 SLC25A46Q96AG3 418 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 SGTBQ96EQ0 304 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 DCLRE1CQ96SD1 692 aaKnown RBP6.94□□□□□ -1.3
IFT88-201ENST00000319980 ALG8Q9BVK2 526 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 NUDT9Q9BW91 350 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 CTSFQ9UBX1 484 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
IFT88-201ENST00000319980 MCIDASD6RGH6 385 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 LOC110117498-PIK3R3F6TDL0 507 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 NDUFB2O95178 105 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 IL1AP01583 271 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 HIST1H1CP16403 213 aaKnown RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 TGM1P22735 817 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 NR0B1P51843 470 aaKnown RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 HNRNPA0Q13151 305 aaKnown RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 HLA-DQA1Q5Y7H0 255 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 GUSBP11Q6P575 273 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 TMPRSS11AQ6ZMR5 421 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 CCDC190Q86UF4 302 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 LAX1Q8IWV1 398 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 FAM98AQ8NCA5 519 aaKnown RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 SDR9C7Q8NEX9 313 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 OR51L1Q8NGJ5 315 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 OR52N1Q8NH53 320 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 DAZLQ92904 295 aaKnown RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 ADIPOR1Q96A54 375 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SLC30A2Q9BRI3 323 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 VN1R1Q9GZP7 353 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 HOXD1Q9GZZ0 328 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SMURF1Q9HCE7 757 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SEMA5BQ9P283 1151 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 MUTYHQ9UIF7 546 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ZNF229Q9UJW7 825 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 BAIAP2Q9UQB8 552 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 PCDHGB6Q9Y5F9 930 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 IER3IP1Q9Y5U9 82 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms