RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 FAM181AQ8N9Y4 354 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 CASTOR1Q8WTX7 329 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 ADAMTS14Q8WXS8 1223 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 ZNF471Q9BX82 626 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-201ENST00000318607 HRASLSQ9HDD0 168 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 UBE2QL1A1L167 161 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 LINC00862A6NCI5 91 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 CXCL14O95715 111 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 HLA-DQA2P01906 255 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 HMGN1P05114 100 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 HOXD4P09016 255 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-201ENST00000318607 MMP12P39900 470 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 OMPP47874 163 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 TPMTP51580 245 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 FOXK2Q01167 660 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 ZNF169Q14929 603 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-201ENST00000318607 MED18Q9BUE0 208 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 LIN7BQ9HAP6 207 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 SLC39A1Q9NY26 324 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 HS3ST2Q9Y278 367 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 HELZP42694 1942 aaKnown RBP13.15□□□□□ -0.3
PABPC1-201ENST00000318607 AGPAT2O15120 278 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-201ENST00000318607 GREM1O60565 184 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 FOXRED2Q8IWF2 684 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 SLC35A4Q96G79 324 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 ZNF558Q96NG5 402 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 NMNAT3Q96T66 252 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 CD93Q9NPY3 652 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 LHX9Q9NQ69 397 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
PABPC1-201ENST00000318607 CABIN1Q9Y6J0 2220 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 IRGMA1A4Y4 181 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 SLC22A23A1A5C7 686 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 C4orf51C9J302 202 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 THY1P04216 161 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 GLAP06280 429 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 F3P13726 295 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 RBMS1P29558 406 aaKnown RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 PGDP52209 483 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 WDR88Q6ZMY6 472 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 OR4D10Q8NGI6 311 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 BPIFA2Q96DR5 249 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 MRPS30Q9NP92 439 aaKnown RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 TRIM3O75382 744 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 OR8G3PP0DMU2 310 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 CCR9P51686 369 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 GBX2P52951 348 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 UNQ6126/PRO20091Q6UXV3 157 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 COX18Q8N8Q8 333 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 FCAMRQ8WWV6 532 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 METTL2AQ96IZ6 378 aaKnown RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 LYSMD1Q96S90 227 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 MFFQ9GZY8 342 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 EXO5Q9H790 373 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 FANCFQ9NPI8 374 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 SPHK1Q9NYA1 384 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 PCDHGA5Q9Y5G8 931 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 E9PQ18 207 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 GPANK1O95872 356 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 ZGLP1P0C6A0 271 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 GTF2F2P13984 249 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 ITGB8P26012 769 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 BMP8BP34820 402 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 BTG1P62324 171 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 SREBF2Q12772 1141 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 CLLU1Q5K131 121 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 MRPL2Q5T653 305 aaKnown RBP13.14□□□□□ -0.31
PABPC1-201ENST00000318607 NIPAL3Q6P499 406 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 UBE3DQ7Z6J8 389 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 GPALPP1Q8IXQ4 340 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 TMEM185AQ8NFB2 350 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 LRRC46Q96FV0 321 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 PCDHB16Q9NRJ7 776 aa13.14□□□□□ -0.31
PABPC1-201ENST00000318607 TRIM77I1YAP6 450 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 RLN2P04090 185 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 EPXP11678 715 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 DRD2P14416 443 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 BCL6P41182 706 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 MTNR1BP49286 362 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 DCAF12L2Q5VW00 463 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 ZNF627Q7L945 461 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 CXorf40AQ8TE69 158 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 SGPP1Q9BX95 441 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 CHST6Q9GZX3 395 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 TCF7L1Q9HCS4 588 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 ZNF230Q9UIE0 474 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-201ENST00000318607 FBXO4Q9UKT5 387 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 POMT2Q9UKY4 750 aa13.13□□□□□ -0.31
PABPC1-201ENST00000318607 GBF1Q92538 1859 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms