RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FAM71CQ8NEG0 241 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 OR2T35Q8NGX2 323 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 OR51A7Q8NH64 312 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 ZNF707Q96C28 371 aaPredicted RBP17.62■□□□□ 0.41
RTN4-201ENST00000317610 SMIM10Q96HG1 83 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 NRIP3Q9NQ35 241 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 FBXO34Q9NWN3 711 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 THAP10Q9P2Z0 257 aaPredicted RBP17.62■□□□□ 0.41
RTN4-201ENST00000317610 SERTAD3Q9UJW9 196 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 A0A1W2PPK0 400 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 MID1O15344 667 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 SCO1O75880 301 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 CFDP00746 253 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 IFNGP01579 166 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 GYPBP06028 91 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 OR2T7P0C7T2 308 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 DRD5P21918 477 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 GBX2P52951 348 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 GGTLC2Q14390 218 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 ELFN2Q5R3F8 820 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 TMEM65Q6PI78 240 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 OR4N5Q8IXE1 308 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 CMTM4Q8IZR5 234 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 OR2T27Q8NH04 317 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 CEP76Q8TAP6 659 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 PHYHIPQ92561 330 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 DACT3Q96B18 629 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 CAPNS2Q96L46 248 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 ERMAPQ96PL5 475 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 SERINC2Q96SA4 455 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 SPRTNQ9H040 489 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 C12orf10Q9HB07 376 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 NPDC1Q9NQX5 325 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 EVA1BQ9NVM1 165 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 FBXL21Q9UKT6 434 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 A0A1B0GUH1 482 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 GMDSO60547 372 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 PRKACBP22694 351 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 SLC6A6P31641 620 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 SIRPAP78324 504 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 SIM1P81133 766 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 DHODHQ02127 395 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 CRYZQ08257 329 aaKnown RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 SUZ12Q15022 739 aaKnown RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 RPL22L1Q6P5R6 122 aaKnown RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 ADGRG3Q86Y34 549 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 LSMEM1Q8N8F7 131 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 PMM1Q92871 262 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 LRFN5Q96NI6 719 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 STACQ99469 402 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 ZNF559Q9BR84 538 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 ZNF426Q9BUY5 554 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 C1QTNF7Q9BXJ2 289 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 METTL17Q9H7H0 456 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 MCCC2Q9HCC0 563 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 HRASLSQ9HDD0 168 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 AKAP7Q9P0M2 348 aaPredicted RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 AK6Q9Y3D8 172 aaKnown RBP17.61■□□□□ 0.41
RTN4-201ENST00000317610 MAB21L2Q9Y586 359 aa17.61■□□□□ 0.41
RTN4-201ENST00000317610 NPIPA5A0A0B4J1W7 369 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 A0A0B4J2E0 115 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 A0A1B0GX12 115 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 NAP1L6A6NFF2 107 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 NPIPA7E9PJI5 369 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 ATP1B1P05026 303 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 NPIPA8P0DM63 369 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 UBL4AP11441 157 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 BLVRAP53004 296 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 RUNX2Q13950 521 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 UBE2Q1Q7Z7E8 422 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 POMGNT2Q8NAT1 580 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 GSX2Q9BZM3 304 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 EVA1AQ9H8M9 152 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 ECDO95905 644 aaPredicted RBP17.6■□□□□ 0.41
RTN4-201ENST00000317610 PAK4O96013 591 aaPredicted RBP17.6■□□□□ 0.41
RTN4-201ENST00000317610 PSMB1P20618 241 aaKnown RBP17.6■□□□□ 0.41
RTN4-201ENST00000317610 SDHBP21912 280 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 RAB14P61106 215 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 MTFR2Q6P444 385 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 FAM199XQ6PEV8 388 aaPredicted RBP17.6■□□□□ 0.41
RTN4-201ENST00000317610 Q6ZTK2 550 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 SLC51BQ86UW2 128 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 BPHLQ86WA6 291 aaPredicted RBP17.6■□□□□ 0.41
RTN4-201ENST00000317610 IZUMO1Q8IYV9 350 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 FTMTQ8N4E7 242 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 EID2Q8N6I1 236 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 COX18Q8N8Q8 333 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 CDRT4Q8N9R6 151 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 OR2T4Q8NH00 348 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 ZNF671Q8TAW3 534 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 POF1BQ8WVV4 589 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 TM4SF19Q96DZ7 209 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 OR14A2Q96R54 314 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 TNFRSF13CQ96RJ3 184 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 TMEM27Q9HBJ8 222 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 ADAP2Q9NPF8 381 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 OR6C2Q9NZP2 312 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 POMT2Q9UKY4 750 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 DAPP1Q9UN19 280 aa17.6■□□□□ 0.41
RTN4-201ENST00000317610 A0A087WV62 115 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms