RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 LIMS3P0CW19 117 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 LIMS4P0CW20 117 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 NAA10P41227 235 aaPredicted RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 RPS7P62081 194 aaKnown RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ACY1Q03154 408 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PRKCDQ05655 676 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ZNF468Q5VIY5 522 aaPredicted RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 AADACL4Q5VUY2 407 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 UBE2UQ5VVX9 321 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 SLC46A3Q7Z3Q1 461 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ATCAYQ86WG3 371 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ZNF563Q8TA94 476 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 TAAR8Q969N4 342 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 SLC25A36Q96CQ1 311 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ZMYND19Q96E35 227 aaPredicted RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 TIMP4Q99727 224 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 RACGAP1Q9H0H5 632 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PLCXD1Q9NUJ7 323 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 COPS7AQ9UBW8 275 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PRODH2Q9UF12 536 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PISDQ9UG56 409 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 LSM2Q9Y333 95 aaKnown RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PTRH2Q9Y3E5 179 aaKnown RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 MMACHCQ9Y4U1 282 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 IER3IP1Q9Y5U9 82 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PCSK5Q92824 1860 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 COL12A1Q99715 3063 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 FRG2CA6NGY1 282 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 C11orf98E9PRG8 122 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PLD2O14939 933 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ZNF264O43296 627 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 NDUFB5O43674 189 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 TSPAN2O60636 221 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 PTP4A3O75365 173 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 F8A1P23610 371 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 OPRL1P41146 370 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 MTNR1AP48039 350 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 RPS6KA3P51812 740 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ZFP36L1Q07352 338 aaKnown RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 COX10Q12887 443 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 OVCH1Q7RTY7 1134 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 BMP8AQ7Z5Y6 402 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 FAM26EQ8N5C1 309 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 OR52E2Q8NGJ4 325 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 DAZLQ92904 295 aaKnown RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 NAT6Q93015 286 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 MYDGFQ969H8 173 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ERMAPQ96PL5 475 aaPredicted RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 EXOSC4Q9NPD3 245 aaKnown RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 QPCTLQ9NXS2 382 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 FOXJ2Q9P0K8 574 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 GRIP1Q9Y3R0 1128 aa6.38□□□□□ -1.39
LYSMD3-201ENST00000315948 FREM3P0C091 2139 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 AIREO43918 545 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 GABARAPO95166 117 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 LDOC1O95751 146 aaPredicted RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 CLEC2LP0C7M8 214 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 PEPDP12955 493 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 CD59P13987 128 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 EVI2BP34910 448 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 MAGEA8P43361 318 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 BMXP51813 675 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 TBCEQ15813 527 aaPredicted RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 BTBD16Q32M84 506 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 FAM198BQ6UWH4 519 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ANKRD13BQ86YJ7 626 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 SLC15A4Q8N697 577 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ZNF441Q8N8Z8 693 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 SLC37A3Q8NCC5 494 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 KISS1RQ969F8 398 aaPredicted RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ARL5BQ96KC2 179 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 TBL1XR1Q9BZK7 514 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 RPS6KB2Q9UBS0 482 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 PCDHGA3Q9Y5H0 932 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 SPTBN4Q9H254 2564 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ANKRD11Q6UB99 2663 aaPredicted RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 A0A087WUJ7 227 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ANKRD34CP0C6C1 535 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 IDUAP35475 653 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 MAGEB1P43366 347 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 B3GNTL1Q67FW5 361 aaPredicted RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ULK3Q6PHR2 472 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 LINC00114Q6XXX2 140 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 CXXC5Q7LFL8 322 aaKnown RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 SLC29A4Q7RTT9 530 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 KMT5CQ86Y97 462 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 CYP4Z2PQ8N1L4 340 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 LSMEM1Q8N8F7 131 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 RAB2BQ8WUD1 216 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 IPCEF1Q8WWN9 437 aaPredicted RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ORAI1Q96D31 301 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 TMEM80Q96HE8 168 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 PLEKHA8Q96JA3 519 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 Q96M85 177 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 SECISBP2Q96T21 854 aaKnown RBP6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 TUBA1CQ9BQE3 449 aa6.37□□□□□ -1.39
LYSMD3-201ENST00000315948 ZNF649Q9BS31 505 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms