RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 GP1BBP13224 206 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 CD46P15529 392 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 MST1P26927 711 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 DCKP27707 260 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 GPR85P60893 370 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 KCNAB2Q13303 367 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 TIGD3Q6B0B8 471 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 PODNL1Q6PEZ8 512 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 ULK3Q6PHR2 472 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 ZBTB49Q6ZSB9 765 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 OR1J4Q8NGS1 313 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 SLC7A13Q8TCU3 470 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 DNAJA4Q8WW22 397 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-201ENST00000315491 SLC38A4Q969I6 547 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 C3orf49Q96BT1 292 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 C5orf34Q96MH7 638 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 PRSS27Q9BQR3 290 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 HES7Q9BYE0 225 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 PTGES2Q9H7Z7 377 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 PCDHGA9Q9Y5G4 932 aaKnown RBP14.66□□□□□ -0.06
TUBB3-201ENST00000315491 ASPMQ8IZT6 3477 aa14.66□□□□□ -0.06
TUBB3-201ENST00000315491 SULT1C4O75897 302 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 SLC1A3P43003 542 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 SEC23BQ15437 767 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 MICAQ29983 383 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 FREM2Q5SZK8 3169 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 OTUD3Q5T2D3 398 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-201ENST00000315491 TBPL2Q6SJ96 375 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 CBR4Q8N4T8 237 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 PACRGLQ8N7B6 248 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 OR10G2Q8NGC3 310 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 TMEM234Q8WY98 164 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 SLC29A1Q99808 456 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 FAM173AQ9BQD7 235 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 GABARAPL1Q9H0R8 117 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 MED17Q9NVC6 651 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 KLF13Q9Y2Y9 288 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-201ENST00000315491 SOCS2O14508 198 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 NME2P1O60361 137 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 NME2P22392 152 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 PRKACGP22612 351 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 TNFSF10P50591 281 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 ZNF41P51814 821 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-201ENST00000315491 TBR1Q16650 682 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 ARSKQ6UWY0 536 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 WDR88Q6ZMY6 472 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 SULF2Q8IWU5 870 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 OR2M7Q8NG81 312 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 TRUB1Q8WWH5 349 aaKnown RBP14.65□□□□□ -0.06
TUBB3-201ENST00000315491 ACOT11Q8WXI4 607 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-201ENST00000315491 ST8SIA1Q92185 356 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 C1GALT1C1Q96EU7 318 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 SCMH1Q96GD3 660 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 ADAM19Q9H013 955 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 KLHL1Q9NR64 748 aa14.65□□□□□ -0.06
TUBB3-201ENST00000315491 URB1O60287 2271 aaKnown RBP14.64□□□□□ -0.07
TUBB3-201ENST00000315491 A0A087WUU8 490 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 PINLYPA6NC86 204 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 TMEM8BA6NDV4 472 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 FAM47E-STBD1D6RA91 191 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 EI24O14681 340 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 RASAL1O95294 804 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 NTN1O95631 604 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 PRKCAP17252 672 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 TACR3P29371 465 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 CXADRP78310 365 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 ZNF766Q5HY98 468 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 PPP4R4Q6NUP7 873 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 ZNF730Q6ZMV8 503 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 GRINAQ7Z429 371 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 GALNTL5Q7Z4T8 443 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 ATG4DQ86TL0 474 aaPredicted RBP14.64□□□□□ -0.07
TUBB3-201ENST00000315491 OR9Q2Q8NGE9 314 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 TMEM255BQ8WV15 326 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 TM9SF4Q92544 642 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 GNRHR2Q96P88 292 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 C12orf10Q9HB07 376 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 C8orf4Q9NR00 106 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 BOKQ9UMX3 212 aaPredicted RBP14.64□□□□□ -0.07
TUBB3-201ENST00000315491 VDAC3Q9Y277 283 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 CACNA1AO00555 2505 aa14.64□□□□□ -0.07
TUBB3-201ENST00000315491 ACACAQ13085 2346 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 CEP295Q9C0D2 2601 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 A0A087WUJ7 227 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 ARRDC5A6NEK1 342 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 LRRC3CA6NJW4 275 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 OR10H3O60404 316 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 CBR3O75828 277 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 PNMTP11086 282 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 MYF6P23409 242 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 DLX5P56178 289 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 DSCR4P56555 118 aaPredicted RBP14.63□□□□□ -0.07
TUBB3-201ENST00000315491 DAG1Q14118 895 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 PLPPR5Q32ZL2 321 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 LINC00114Q6XXX2 140 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 LINC00471Q8N535 108 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 TMEM178AQ8NBL3 297 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 OR4K5Q8NGD3 323 aa14.63□□□□□ -0.07
TUBB3-201ENST00000315491 TMEM239Q8WW34 195 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms