RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ALDH3A2P51648 485 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 B3GALT5-AS1P59052 145 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 ALDH6A1Q02252 535 aaKnown RBP20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 WDR88Q6ZMY6 472 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 HS3ST5Q8IZT8 346 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 OR52J3Q8NH60 311 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 TMEM234Q8WY98 164 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 ST8SIA1Q92185 356 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 NRBF2Q96F24 287 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 ADAM19Q9H013 955 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 ZDHHC11Q9H8X9 412 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 OSGIN1Q9UJX0 560 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 RAB26Q9ULW5 256 aa20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 PRRC2CQ9Y520 2896 aaKnown RBP20.27■□□□□ 0.84
CCDC85B-201ENST00000312579 OR2M5A3KFT3 312 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 TRAPPC13A5PLN9 417 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 NPIPA5E9PKD4 350 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNHIT1O43257 154 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 OPN1LWP04000 364 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 SLC10A1Q14973 349 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 TMEM44Q2T9K0 475 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 ALG10BQ5I7T1 473 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNF613Q6PF04 617 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 GRINAQ7Z429 371 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNF605Q86T29 641 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 SIAH3Q8IW03 269 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 ATP6V1C2Q8NEY4 427 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 RBM4BQ9BQ04 359 aaKnown RBP20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 FNDC11Q9BVV2 318 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 RBM4Q9BWF3 364 aaKnown RBP20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 GABARAPL1Q9H0R8 117 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 NMNAT1Q9HAN9 279 aaPredicted RBP20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 MAN2C1Q9NTJ4 1040 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 ACAD8Q9UKU7 415 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 NPIPA1Q9UND3 350 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 LYVE1Q9Y5Y7 322 aa20.27■□□□□ 0.83
CCDC85B-201ENST00000312579 OR5F1O95221 314 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 INAQ16352 499 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 SLC25A53Q5H9E4 307 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 ULK3Q6PHR2 472 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 ATG4DQ86TL0 474 aaPredicted RBP20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 ADGRG3Q86Y34 549 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 P3H2Q8IVL5 708 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 NKAIN4Q8IVV8 208 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 GTPBP8Q8N3Z3 284 aaPredicted RBP20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 ZBTB8AQ96BR9 441 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 DNAJA3Q96EY1 480 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 WBP1Q96G27 269 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNF570Q96NI8 536 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 OSBPL10Q9BXB5 764 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 TMEM185BQ9H7F4 350 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 SMPD3Q9NY59 655 aaPredicted RBP20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 USE1Q9NZ43 259 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 PDP1Q9P0J1 537 aaPredicted RBP20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 TNFRSF10DQ9UBN6 386 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 AP4B1Q9Y6B7 739 aa20.26■□□□□ 0.83
CCDC85B-201ENST00000312579 TMED7-TICAM2A0A0A6YYA0 188 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 ETV2O00321 342 aaPredicted RBP20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 GADD45GO95257 159 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 PEPDP12955 493 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 POLR2HP52434 150 aaKnown RBP20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 NFATC3Q12968 1075 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 FAM180AQ6UWF9 173 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 OFCC1Q8IZS5 231 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 SNRNP40Q96DI7 357 aaKnown RBP20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 MRGPRX4Q96LA9 322 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 SFXN2Q96NB2 322 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 PRSS27Q9BQR3 290 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 SMURF2Q9HAU4 748 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 QPCTLQ9NXS2 382 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 TMED7Q9Y3B3 224 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 MRPS18CQ9Y3D5 142 aaKnown RBP20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNF337Q9Y3M9 751 aa20.25■□□□□ 0.83
CCDC85B-201ENST00000312579 TMEM72A0PK05 275 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 ALPLP05186 524 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 PRKACGP22612 351 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 STARP49675 285 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 DLX5P56178 289 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 LSM11P83369 360 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 PPP2R2BQ00005 443 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 HSF1Q00613 529 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 GK3PQ14409 553 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 LAPTM4AQ15012 233 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 C6orf52Q5T4I8 152 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 TRILQ7L0X0 811 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 PIK3C3Q8NEB9 887 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 OR4C15Q8NGM1 316 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 DNAJA4Q8WW22 397 aaPredicted RBP20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 BARD1Q99728 777 aaKnown RBP20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 LDAHQ9H6V9 325 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 ACKR4Q9NPB9 350 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 SELENONQ9NZV5 590 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 IGSF10Q6WRI0 2623 aa20.24■□□□□ 0.83
CCDC85B-201ENST00000312579 H3BML4 177 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 CHP2O43745 196 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 H1F0P07305 194 aaKnown RBP20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 THRBP10828 461 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 SHC1P29353 583 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 EIF1P41567 113 aaKnown RBP20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 GFRA1P56159 465 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms