RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PNLIPRP3Q17RR3 467 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 RNF212Q495C1 297 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 SULF2Q8IWU5 870 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 MFSD9Q8NBP5 474 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 GPR78Q96P69 363 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 WDR76Q9H967 626 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 NDRG3Q9UGV2 375 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 KPTNQ9Y664 436 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 WDR90Q96KV7 1748 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 REEP5Q00765 189 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ACY1Q03154 408 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 PRDX1Q06830 199 aaKnown RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 PCGF3Q3KNV8 242 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 MORN1Q5T089 497 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 H3F3CQ6NXT2 135 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ANKRD53Q8N9V6 530 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 GNPNAT1Q96EK6 184 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 CMSS1Q9BQ75 279 aaKnown RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM43Q9BTV4 400 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 CHRDL1Q9BU40 450 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 AMBNQ9NP70 447 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF175Q9Y473 711 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 TRAV6A0A075B6T7 132 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 LOC100289279A0A1B0GTE1 492 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 MGMTP16455 207 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 CALCRP30988 508 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 NR0B1P51843 470 aaKnown RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 RD3Q7Z3Z2 195 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF546Q86UE3 836 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 C12orf45Q8N5I9 185 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 FRMD1Q8N878 549 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 BPIFA2Q96DR5 249 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ZFYVE21Q9BQ24 234 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ERVK13-1Q9NX77 482 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ACACAQ13085 2346 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 HMSDA8MTL9 139 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 GABRPO00591 440 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ADAMTS4O75173 837 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 LEFTY1O75610 366 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 PRSS23O95084 383 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 APOC3P02656 99 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 RAC2P15153 192 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 IMPA1P29218 277 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM200AQ86VY9 491 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 SMPDL3BQ92485 455 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 P2RY13Q9BPV8 354 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 AKIP1Q9NQ31 210 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 PARPBPQ9NWS1 579 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 TICRRQ7Z2Z1 1910 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 A0A0D9SEW6 157 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 GRXCR1A8MXD5 290 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 AIPO00170 330 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 IGLV3-27P01718 113 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ALDOCP09972 364 aaKnown RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 B3GNTL1Q67FW5 361 aaPredicted RBP8.25□□□□□ -1.09
COL6A5-202ENST00000312481 LINC01465Q8N7H1 131 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 OR52H1Q8NGJ2 320 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 PHOSPHO1Q8TCT1 267 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 DHRS9Q9BPW9 319 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ARPC5LQ9BPX5 153 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 GPR174Q9BXC1 333 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 GPR160Q9UJ42 338 aa8.25□□□□□ -1.09
COL6A5-202ENST00000312481 ANTXRLA6NF34 631 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 OR6C76A6NM76 312 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 NUDT7P0C024 238 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SIRPAP78324 504 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ACSM3Q53FZ2 586 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 STEAP3Q658P3 488 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 CLDN19Q8N6F1 224 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 OR6F1Q8NGZ6 308 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 OR14A2Q96R54 314 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PPIL3Q9H2H8 161 aaKnown RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ZAR1LA6NP61 321 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PROS1P07225 676 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SOX18P35713 384 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 LMAN2Q12907 356 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SLC5A12Q1EHB4 618 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ENTPD8Q5MY95 495 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 Q6ZVU0 165 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 NANOGP1Q8N7R0 232 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 OR5D16Q8NGK9 328 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM203Q969S6 136 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SMIM19Q96E16 107 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 EIF4E2O60573 245 aaKnown RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 GPR75O95800 540 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 XCR1P46094 333 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 MRPS21P82921 87 aaKnown RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 C14orf28Q4W4Y0 310 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ELP2Q6IA86 826 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SSX6Q7RTT6 188 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 CACUL1Q86Y37 369 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 CLIP4Q8N3C7 705 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SLC22A24Q8N4F4 322 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 HBEGFQ99075 208 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 TP63Q9H3D4 680 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms