RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 AHRRA9YTQ3 701 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 E9PLN8 166 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 LINC01387J3KSC0 135 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 J3KTA2 159 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ADAMDEC1O15204 470 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 WDR1O75083 606 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 AQP8O94778 261 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 PRKD3O94806 890 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 LYPD3O95274 346 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ME2P23368 584 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ELK4P28324 431 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 GCKP35557 465 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 APOBEC1P41238 236 aaKnown RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ERFP50548 548 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 POLR2HP52434 150 aaKnown RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 CDH12P55289 794 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 NUP107P57740 925 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 NCALDP61601 193 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 COPZ1P61923 177 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 EGR4Q05215 589 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 SELENBP1Q13228 472 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 SYT14P1Q58G82 188 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 C1orf185Q5T7R7 199 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 C3orf33Q6P1S2 294 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 PGM2L1Q6PCE3 622 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 B3GNT6Q6ZMB0 384 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 WDR88Q6ZMY6 472 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 DEF8Q6ZN54 512 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 CCDC71Q8IV32 467 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 PM20D2Q8IYS1 436 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 C9orf106Q8NAJ2 232 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 BHLHE22Q8NFJ8 381 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 TNIP2Q8NFZ5 429 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 FNDC9Q8TBE3 224 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ZPLD1Q8TCW7 415 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ADAMTS16Q8TE57 1224 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 SLC35B4Q969S0 331 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 DOCK7Q96N67 2140 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 VKORC1Q9BQB6 163 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 AMBRA1Q9C0C7 1298 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 GORASP2Q9H8Y8 452 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 CLCF1Q9UBD9 225 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 TESQ9UGI8 421 aaKnown RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 BAG5Q9UL15 447 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 PRPF19Q9UMS4 504 aaKnown RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 USP9YO00507 2555 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 ARHGAP21Q5T5U3 1957 aa8.16□□□□□ -1.1
PDE4D-201ENST00000309641 NCOA6Q14686 2063 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-201ENST00000309641 IGKV1D-42A0A075B6H8 117 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 IGHV3-15A0A0B4J1V0 119 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 A0A0B4J2E0 115 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 A0A1B0GX12 115 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 GSC2O15499 205 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 IFNA14P01570 189 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 TFPIP10646 304 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 GABRA1P14867 456 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 UQCRBP14927 111 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 CASP6P55212 293 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 KCNC4Q03721 635 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 PIN1Q13526 163 aaPredicted RBP8.15□□□□□ -1.1
PDE4D-201ENST00000309641 PON3Q15166 354 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 ALG10BQ5I7T1 473 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 HBMQ6B0K9 141 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 PPP4R4Q6NUP7 873 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 ESPNLQ6ZVH7 1005 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 FKBP9P1Q75LS8 142 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 MEIOBQ8N635 442 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 OR2V1Q8NHB1 315 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 RNF217Q8TC41 542 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 RASSF5Q8WWW0 418 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 OSTF1Q92882 214 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 ZNF559Q9BR84 538 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 TRIM2Q9C040 744 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 ADPRHL2Q9NX46 363 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 MAGEL2Q9UJ55 1249 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 SLC5A6Q9Y289 635 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 CRYBG3Q68DQ2 2970 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 DOPEY2Q9Y3R5 2298 aa8.15□□□□□ -1.1
PDE4D-201ENST00000309641 INTS1Q8N201 2190 aaKnown RBP8.15□□□□□ -1.1
PDE4D-201ENST00000309641 A0A0G2JNJ9 132 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 A0A1B0GUH1 482 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 CLEC18AA5D8T8 446 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 ZNF814B7Z6K7 855 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 ACOT8O14734 319 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 FFAR1O14842 300 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.11
PDE4D-201ENST00000309641 DIRAS1O95057 198 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 AGFG2O95081 481 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 LDLRP01130 860 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 IMPDH2P12268 514 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 ENPP1P22413 925 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 CXCR1P25024 350 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 SLC7A1P30825 629 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 DIO1P49895 249 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 AGFG1P52594 562 aaKnown RBP8.15□□□□□ -1.11
PDE4D-201ENST00000309641 CARD18P57730 90 aa8.15□□□□□ -1.11
PDE4D-201ENST00000309641 LSM11P83369 360 aaKnown RBP eCLIP8.15□□□□□ -1.11
PDE4D-201ENST00000309641 VLDLRP98155 873 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms