RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 HTR4Q13639 388 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 HSD17B12Q53GQ0 312 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 FAM198BQ6UWH4 519 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 CHCHD4Q8N4Q1 142 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF676Q8N7Q3 588 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 TSEN15Q8WW01 171 aaKnown RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM239Q8WW34 195 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 ACOT11Q8WXI4 607 aaPredicted RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 NXPE2Q96DL1 559 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 PEX11GQ96HA9 241 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 CAMK1GQ96NX5 476 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 LYSMD1Q96S90 227 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SRMSQ9H3Y6 488 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SLC27A6Q9Y2P4 619 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SLC6A5Q9Y345 797 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 CDH10Q9Y6N8 788 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 TRDV1A0A1B0GX56 115 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 EMC8O43402 210 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 PRKACAP17612 351 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 ATF1P18846 271 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 OCLNQ16625 522 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 Q6ZTK2 550 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 ERN2Q76MJ5 926 aaKnown RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 OR5M3Q8NGP4 307 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 DNAJA4Q8WW22 397 aaPredicted RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 ACOT12Q8WYK0 555 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 MED30Q96HR3 178 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 GTPBP2Q9BX10 602 aaKnown RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 PPP1R3EQ9H7J1 279 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 NOX4Q9NPH5 578 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 TRAPPC4Q9Y296 219 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 PLEKHA6Q9Y2H5 1048 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 SESN1Q9Y6P5 492 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 GXYLT2A0PJZ3 443 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 EIF1AYO14602 144 aaKnown RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 TFPIP10646 304 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 STARP49675 285 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 SNRPNP63162 240 aaKnown RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 DLX2Q07687 328 aaPredicted RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 TPBGQ13641 420 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 GAS6Q14393 721 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 RPE65Q16518 533 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 ITPRIPL2Q3MIP1 535 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 TEX261Q6UWH6 196 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 LRRC3BQ96PB8 259 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 FAM83CQ9BQN1 747 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 SLC38A1Q9H2H9 487 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 NPAP1Q9NZP6 1156 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 U3KQ87 197 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 TDRD6O60522 2096 aaKnown RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 LRIT2A6NDA9 550 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 ANXA2P2A6NMY6 339 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 SLC43A1O75387 559 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 ANXA2P07355 339 aaKnown RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF3P17036 446 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 F8A1P23610 371 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 GNA13Q14344 377 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 NDUFA9Q16795 377 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 GARNL3Q5VVW2 1013 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 DEFB119Q8N690 84 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 TBC1D20Q96BZ9 403 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 RASD2Q96D21 266 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 CPNE2Q96FN4 548 aaPredicted RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 B3GNT4Q9C0J1 378 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 KRCC1Q9NPI7 259 aaPredicted RBP13.49□□□□□ -0.25
PTPN9-201ENST00000306726 SERGEFQ9UGK8 458 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 CBLCQ9ULV8 474 aa13.49□□□□□ -0.25
PTPN9-201ENST00000306726 A0A1W2PPL8 197 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 CDC14CA4D256 554 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 ELOA3DA6NLF2 546 aaPredicted RBP13.48□□□□□ -0.25
PTPN9-201ENST00000306726 C4orf51C9J302 202 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 KCNAB3O43448 404 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 TLX1P31314 330 aaPredicted RBP13.48□□□□□ -0.25
PTPN9-201ENST00000306726 GRM7Q14831 915 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 OR1Q1Q15612 314 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 ELOA3BQ3SY89 546 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 ZBTB37Q5TC79 503 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 RTL4Q6ZR62 310 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 NAXEQ8NCW5 288 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 ELOA3Q8NG57 546 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 HCAR2Q8TDS4 363 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 TEAD3Q99594 435 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 SGPP1Q9BX95 441 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 A4GALTQ9NPC4 353 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 PCDHGB7Q9Y5F8 929 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 KNTC1P50748 2209 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 GOSR2O14653 212 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 M6PRP20645 277 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 MAP2K6P52564 334 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 GBX2P52951 348 aaPredicted RBP13.48□□□□□ -0.25
PTPN9-201ENST00000306726 PER3P56645 1201 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 RUNX3Q13761 415 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 DPPA4Q7L190 304 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 PRR22Q8IZ63 422 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 C9orf62Q8N4C0 152 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 CHST4Q8NCG5 386 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 OR4N2Q8NGD1 307 aa13.48□□□□□ -0.25
PTPN9-201ENST00000306726 WNT2BQ93097 391 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms