RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CXorf36Q9H7Y0 433 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 MYO5AQ9Y4I1 1855 aaKnown RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 MYO18AQ92614 2054 aaKnown RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 OR2T1O43869 369 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 PTGER1P34995 402 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 P4HA3Q7Z4N8 544 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 ZNF695Q8IW36 515 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 SCARB1Q8WTV0 552 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 MALSU1Q96EH3 234 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 OR1F2PQ96R84 312 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 ARPC5LQ9BPX5 153 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 LUZP4Q9P127 313 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 SLC6A14Q9UN76 642 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 TIMM8BQ9Y5J9 83 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 TRABD2BA6NFA1 517 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 FAM227AF5H4B4 570 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 TXNL1O43396 289 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 ATG12O94817 140 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 FPR3P25089 353 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 XCR1P46094 333 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 TPMTP51580 245 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 TLE3Q04726 772 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 RTL6Q6ICC9 239 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 ZBED3Q96IU2 234 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 TGM7Q96PF1 710 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 MED20Q9H944 212 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 INIPQ9NRY2 104 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 SLC22A23A1A5C7 686 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 HEPACAM2A8MVW5 462 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 TSTD3H0UI37 97 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 SLC34A2O95436 690 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 NR0B1P51843 470 aaKnown RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 GPR18Q14330 331 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 CCNJQ5T5M9 372 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 PHF19Q5T6S3 580 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 LILRB2Q8N423 598 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 OR52E1Q8NGJ3 308 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 CHTF18Q8WVB6 975 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 C1QTNF3Q9BXJ4 246 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 DEFB126Q9BYW3 111 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 GSX2Q9BZM3 304 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 PRMT8Q9NR22 394 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 NDUFB11Q9NX14 153 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 RPH3AQ9Y2J0 694 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 ETV7Q9Y603 341 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 IGLV3-10A0A075B6K4 115 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 C17orf113A0A1B0GUU1 675 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 SULT1B1O43704 296 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 ADAMTS4O75173 837 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 MED6O75586 246 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 HTR3BO95264 441 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 PRKAR1BP31321 381 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 ARRB2P32121 409 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 CCR6P51684 374 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 AKR1C2P52895 323 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 KCNJ10P78508 379 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 GPLD1P80108 840 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 DLX2Q07687 328 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 HMGN3Q15651 99 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 IDO2Q6ZQW0 420 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 PARS2Q7L3T8 475 aaKnown RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 GPR155Q7Z3F1 870 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 BCDIN3DQ7Z5W3 292 aaKnown RBP11.99□□□□□ -0.49
COL3A1-201ENST00000304636 HCAR1Q9BXC0 346 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 RNF167Q9H6Y7 350 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 PLEKHJ1Q9NW61 149 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 NPFFR2Q9Y5X5 522 aa11.99□□□□□ -0.49
COL3A1-201ENST00000304636 A0A1W2PS29 197 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 HRGP04196 525 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 CPMP14384 443 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 CCR9P51686 369 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 FXYD4P59646 89 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 ACVR1Q04771 509 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 DBPQ10586 325 aaPredicted RBP11.98□□□□□ -0.49
COL3A1-201ENST00000304636 MRPL2Q5T653 305 aaKnown RBP11.98□□□□□ -0.49
COL3A1-201ENST00000304636 OR52R1Q8NGF1 315 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 C3orf49Q96BT1 292 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 MACROD1Q9BQ69 325 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 CXXC1Q9P0U4 656 aaPredicted RBP11.98□□□□□ -0.49
COL3A1-201ENST00000304636 ACOD1A6NK06 481 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 TMEM212A6NML5 194 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 DVL2O14641 736 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 OIP5O43482 229 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 SSX4O60224 188 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 ATP1B1P05026 303 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 ARRB1P49407 418 aaPredicted RBP11.98□□□□□ -0.49
COL3A1-201ENST00000304636 WBP2NLQ6ICG8 309 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 NOX1Q9Y5S8 564 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 CACNA1SQ13698 1873 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 OR52A4PA6NMU1 304 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 ATP6V1G2-DDX39BF2Z307 99 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 ZNF780AO75290 641 aaPredicted RBP11.98□□□□□ -0.49
COL3A1-201ENST00000304636 GPX5O75715 221 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 IL33O95760 270 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 CDK3Q00526 305 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 MALLQ13021 153 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 ZC3H14Q6PJT7 736 aaKnown RBP11.98□□□□□ -0.49
COL3A1-201ENST00000304636 SULF2Q8IWU5 870 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 SLC22A8Q8TCC7 542 aa11.98□□□□□ -0.49
COL3A1-201ENST00000304636 RNF128Q8TEB7 428 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms