RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DBX2Q6ZNG2 339 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 COMMD6Q7Z4G1 85 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 H1FXQ92522 213 aaKnown RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SGPP1Q9BX95 441 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ARHGAP39Q9C0H5 1083 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SLAMF7Q9NQ25 335 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SHPKQ9UHJ6 478 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SIX4Q9UIU6 781 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 PURGQ9UJV8 347 aaKnown RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 WIF1Q9Y5W5 379 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 GJB5O95377 273 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 HLA-HP01893 362 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 NTSR1P30989 418 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 CXCR4P61073 352 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 HMGN3Q15651 99 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 CTSL3PQ5NE16 218 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SLC6A19Q695T7 634 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 FAM111BQ6SJ93 734 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 FAM57BQ71RH2 274 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 FAM160A2Q8N612 972 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 OR8J2Q8NGG1 315 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ADAMTS14Q8WXS8 1223 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 OR52A5Q9H2C5 316 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 HSPB6O14558 160 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ADAM10O14672 748 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 MRPL33O75394 65 aaKnown RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 MTHFD2P13995 350 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 TGM4P49221 684 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 FAM189BP81408 668 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 BTN1A1Q13410 526 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF684Q5T5D7 378 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 MANEALQ5VSG8 457 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 PSAPL1Q6NUJ1 521 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF852Q6ZMS4 543 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 GLIS1Q8NBF1 620 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 RNF170Q96K19 258 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SLC17A9Q9BYT1 436 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SHARPINQ9H0F6 387 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 PELI2Q9HAT8 420 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ARNT2Q9HBZ2 717 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 IGHG1P01857 330 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ETV6P41212 452 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 PMPCAQ10713 525 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SMAD2Q15796 467 aaKnown RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 KCNJ8Q15842 424 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 LCTLQ6UWM7 567 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 PRICKLE2Q7Z3G6 844 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM104Q8NE00 496 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ITPKCQ96DU7 683 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 BCL7BQ9BQE9 202 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 C8orf33Q9H7E9 229 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SAGE1Q9NXZ1 904 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM181Q9P2C4 612 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 CDK4P11802 303 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 HTR5AP47898 357 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 LTBQ06643 244 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 EIF4HQ15056 248 aaKnown RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 RGNQ15493 299 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 Q1RN00 199 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 GTF2H5Q6ZYL4 71 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SLC16A14Q7RTX9 510 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 GRAMD2AQ8IUY3 354 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 PQLC3Q8N755 202 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 C12orf76Q8N812 135 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 BPIFCQ8NFQ6 507 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 IMP4Q96G21 291 aaKnown RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 DECR2Q9NUI1 292 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 C1orf123Q9NWV4 160 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 AJAP1Q9UKB5 411 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF541Q9H0D2 1346 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 SH2D7A6NKC9 451 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 TCAPO15273 167 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 PIGRP01833 764 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 DHRS4L1P0CG22 281 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF888P0CJ79 500 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 MYF6P23409 242 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 RAC1P63000 192 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ARHGAP1Q07960 439 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 C6orf132Q5T0Z8 1188 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF322Q6U7Q0 402 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM184AQ6ZMB5 413 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 SHISA6Q6ZSJ9 500 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 DRAXINQ8NBI3 349 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ABHD11Q8NFV4 315 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 SECTM1Q8WVN6 248 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 IGSF21Q96ID5 467 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 C4orf36Q96KX1 117 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 FOXN4Q96NZ1 517 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 PSD2Q9BQI7 771 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ERVMER34-1Q9H9K5 563 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 SLC35A3Q9Y2D2 325 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 KDM4EB2RXH2 506 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 RFXAPO00287 272 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 HPGDSO60760 199 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 GATMP50440 423 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 SUOXP51687 545 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 EBPQ15125 230 aaKnown RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ADIRFQ15847 76 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 RFPL4BQ6ZWI9 263 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 SSX9Q7RTT3 188 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms