RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 ZNF157P51786 506 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 Q1RN00 199 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 PAGE3Q5JUK9 113 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 USB1Q9BQ65 265 aaKnown RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 TRAF4Q9BUZ4 470 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 MED20Q9H944 212 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 ABCC6O95255 1503 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF207O43670 478 aaKnown RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 MMP7P09237 267 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 TRHRP34981 398 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SIM1P81133 766 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 TMIGD1Q6UXZ0 262 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM182Q6ZP80 229 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 RDH10Q8IZV5 341 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SFTA3P0C7M3 94 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 CCR7P32248 378 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 VITQ6UXI7 678 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 FER1L5A0AVI2 2057 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 H7BYZ3 331 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 PMP2P02689 132 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 KCNE1P15382 129 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 OR1D2P34982 312 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 GRM5P41594 1212 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 HTR3AP46098 478 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 ATRNO75882 1429 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 hCG_1809904A0A1W2PP81 198 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 A0A1W2PR64 198 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 A0A1W2PRV1 198 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 RFPL4AA6NLU0 287 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 RFPL4AL1F8VTS6 287 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SOX9P48436 509 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC11A1P49279 550 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 GGNBP1Q5YKI7 109 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 RGMBQ6NW40 437 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 OR52B6Q8NGF0 335 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC25A32Q9H2D1 315 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 CNOT2Q9NZN8 540 aaKnown RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 FMN2Q9NZ56 1722 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 MROH6A6NGR9 719 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 MFSD6LQ8IWD5 586 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNRF4Q8WWF5 429 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 LIPHQ8WWY8 451 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 SCO2O43819 266 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF90Q03938 601 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 FUT2Q10981 343 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 CLEC12BQ2HXU8 276 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 SUMF1Q8NBK3 374 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 CHST11Q9NPF2 352 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 WIF1Q9Y5W5 379 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 NPIPA5A0A0B4J1W7 369 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 ITGB5P18084 799 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 FGF7P21781 194 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 CLCNKAP51800 687 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 EPHA5P54756 1037 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 TAS2R46P59540 309 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 GUK1Q16774 197 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 C19orf35Q6ZS72 473 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 OR1S2Q8NGQ3 325 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 ENSAO43768 121 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 VWA1Q6PCB0 445 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 GPR148Q8TDV2 347 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 LMTK2Q8IWU2 1503 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 F6UZH7 168 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 MPPED1O15442 326 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 RAD52P43351 418 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 PIP5KL1Q5T9C9 394 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 NUP43Q8NFH3 380 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 KLHL13Q9P2N7 655 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 PGCP20142 388 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 C22orf15Q8WYQ4 148 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 FOXN4Q96NZ1 517 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 C1orf123Q9NWV4 160 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 DUS2Q9NX74 493 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 IL17BQ9UHF5 180 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 MYBPHLA2RUH7 354 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 HOXD1Q9GZZ0 328 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 A6NIZ1 184 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 THBS3P49746 956 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 RAP1BP61224 184 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 WDR5P61964 334 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF528Q3MIS6 628 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 KIAA2026Q5HYC2 2103 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM239Q8WW34 195 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 CDHR4A6H8M9 788 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 C2orf78A6NCI8 922 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 FRS3O43559 492 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 TPPP2P59282 170 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 RPS24P62847 133 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 CD300CQ08708 224 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 FAM71F1Q96KD3 344 aaPredicted RBP11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 IGSF5Q9NSI5 407 aa11.04□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF724A8MTY0 619 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 PHYHO14832 338 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 ZFP62Q8NB50 900 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms