RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SSTR2P30874 369 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 EVI2BP34910 448 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 ERVK-16P61578 105 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CCSMST1Q4G0I0 132 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 TMEM244Q5VVB8 128 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 FCRLAQ7L513 359 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 TECPR1Q7Z6L1 1165 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 UBXN10Q96LJ8 280 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 MFFQ9GZY8 342 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 RABL2AQ9UBK7 228 aaPredicted RBP10.69□□□□□ -0.7
USP53-201ENST00000274030 RABL2BQ9UNT1 228 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 PLSCR5A0PG75 271 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 AQP9O43315 295 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 PIP5K1CO60331 668 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 TM4SF4P48230 202 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 SIMC1Q8NDZ2 872 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 ZNF681Q96N22 645 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 SOCS7O14512 581 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 NUPL2O15504 423 aaKnown RBP10.69□□□□□ -0.7
USP53-201ENST00000274030 TNFSF8P32971 234 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CAMK2DQ13557 499 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CST9Q5W186 159 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 C3P1Q6ZMU1 363 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 NDUFAF7Q7L592 441 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 HSD17B8Q92506 261 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 KHSRPQ92945 711 aaKnown RBP eCLIP10.69□□□□□ -0.73e-6■■■□□ 15.5
USP53-201ENST00000274030 AP1S3Q96PC3 154 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 TNFRSF13CQ96RJ3 184 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 A0A1B0GVG6 124 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 TMEM72A0PK05 275 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 C7orf72A4D263 438 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 SIGLEC6O43699 453 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CSF1P09603 554 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 ARAFP10398 606 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CX3CR1P49238 355 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 TRA2BP62995 288 aaKnown RBP10.69□□□□□ -0.7
USP53-201ENST00000274030 MELKQ14680 651 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 BCDIN3DQ7Z5W3 292 aaKnown RBP10.69□□□□□ -0.7
USP53-201ENST00000274030 OR5D18Q8NGL1 313 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 PDLIM5Q96HC4 596 aaKnown RBP10.69□□□□□ -0.7
USP53-201ENST00000274030 CTRCQ99895 268 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 VN1R3Q9BXE9 311 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CPNE5Q9HCH3 593 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 PLEKHM1Q9Y4G2 1056 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CEPT1Q9Y6K0 416 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 ZNF264O43296 627 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 LILRB5O75023 590 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ATG12O94817 140 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 IGHG1P01857 330 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 TACR3P29371 465 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ARL6IP1Q15041 203 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 COX20Q5RI15 118 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 WFDC5Q8TCV5 224 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 OR6C1Q96RD1 312 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 DUSP23Q9BVJ7 150 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 OLAHQ9NV23 265 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 HOXC13P31276 330 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 GABRA2P47869 451 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 KCTD11Q693B1 232 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 C19orf47Q8N9M1 422 aaKnown RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 NUDT8Q8WV74 236 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 HHIPL1Q96JK4 782 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ELF4Q99607 663 aaPredicted RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 CPPED1Q9BRF8 314 aaPredicted RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 SLC6A20Q9NP91 592 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 TMEM45AQ9NWC5 275 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 MARCH5Q9NX47 278 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 HS3ST2Q9Y278 367 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 NUBP2Q9Y5Y2 271 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 CD300LBA8K4G0 201 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 MAKP20794 623 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ALDH3B1P43353 468 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 RPS18P62269 152 aaKnown RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 SF3A2Q15428 464 aaKnown RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 FBXW12Q6X9E4 464 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 Q6ZSR9 355 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 MFSD9Q8NBP5 474 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 FNDC9Q8TBE3 224 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 BRIX1Q8TDN6 353 aaKnown RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 SNAPC3Q92966 411 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 SLAMF9Q96A28 289 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 NICN1Q9BSH3 213 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 PITHD1Q9GZP4 211 aaPredicted RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 ANKRD10Q9NXR5 420 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 GABRPO00591 440 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ACP2P11117 423 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ITGAMP11215 1152 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 LTBQ06643 244 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 AGAP7PQ5VUJ5 663 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 AGAP6Q5VW22 663 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 CLEC14AQ86T13 490 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 AGAP4Q96P64 663 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 WDR83Q9BRX9 315 aaKnown RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 NOX3Q9HBY0 568 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 KLHL42Q9P2K6 505 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 RCE1Q9Y256 329 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 H3BUI4 141 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 F11P03951 625 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 SNRPBP14678 240 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms