RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 MAMDC2Q7Z304 686 aaPredicted RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 RPS19BP1Q86WX3 136 aaKnown RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 ACBD7Q8N6N7 88 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 LRRC17Q8N6Y2 441 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF721Q8TF20 911 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 UFD1Q92890 307 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 LGALS12Q96DT0 336 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZMYND19Q96E35 227 aaPredicted RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 GPA33Q99795 319 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 KATNB1Q9BVA0 655 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 DCSTAMPQ9H295 470 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 DUSP21Q9H596 190 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 DKKL1Q9UK85 242 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF337Q9Y3M9 751 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 C12orf71A8MTZ7 269 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 CDC42EP2O14613 210 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 AHCYL1O43865 530 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 TNFSF15O95150 251 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 DDAH2O95865 285 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 MT-CO3P00414 261 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 PTHP01270 115 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 P04436 131 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF28P17035 718 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 GRPRP30550 384 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 SLC26A5P58743 744 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 PRPS1P60891 318 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 CRMP1Q14194 572 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ARL9Q6T311 187 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 FAM220AQ7Z4H9 259 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 MAML2Q8IZL2 1156 aaPredicted RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 POMGNT2Q8NAT1 580 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 DEFB124Q8NES8 71 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 MOSPD2Q8NHP6 518 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF582Q96NG8 517 aaPredicted RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 TMED9Q9BVK6 235 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 EVA1AQ9H8M9 152 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 MAN2C1Q9NTJ4 1040 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 FLRT3Q9NZU0 649 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 KIF26BQ2KJY2 2108 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 RALGAPA1Q6GYQ0 2036 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 A0A0B4J2E0 115 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 A0A1B0GX12 115 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SMIM30A4D0T7 59 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SLC22A31A6NKX4 558 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 H3BMQ9 156 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SOCS6O14544 535 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 CASKO14936 926 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SLC22A1O15245 554 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 CD63P08962 238 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 ANKRD34CP0C6C1 535 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 IMPDH2P12268 514 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SLC1A3P43003 542 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OMPP47874 163 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 FOXK2Q01167 660 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SYT14P1Q58G82 188 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OR2G6Q5TZ20 316 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 LCN1P1Q5VSP4 162 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 UBQLNLQ8IYU4 475 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 COG8Q96MW5 612 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 LINC00854A0A1B0GVQ3 168 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 NPIPA5E9PKD4 350 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 AKAP8O43823 692 aaKnown RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 SUSD5O60279 629 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 ITGA10O75578 1167 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 RPP14O95059 124 aaKnown RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 EPPINO95925 133 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SOX3P41225 446 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OR7A5Q15622 319 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 TRIP6Q15654 476 aaKnown RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 ZNF141Q15928 474 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.53□□□□□ -1.04
SSR3-201ENST00000265044 ABHD17BQ5VST6 288 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 CCDC71Q8IV32 467 aaPredicted RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 ZBTB44Q8NCP5 570 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OR5W2Q8NH69 310 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 FAR1Q8WVX9 515 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 MESP1Q9BRJ9 268 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 CDADC1Q9BWV3 514 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 RPRD1BQ9NQG5 326 aaKnown RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 SNTG1Q9NSN8 517 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 CNOT2Q9NZN8 540 aaKnown RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 NPIPA1Q9UND3 350 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 FARSAQ9Y285 508 aaKnown RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 ADAM18Q9Y3Q7 739 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 TMED7-TICAM2A0A0A6YYA0 188 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OCM2P0CE71 109 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OCMP0CE72 109 aaPredicted RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 GADD45AP24522 165 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 DLSTP36957 453 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 P2RX1P51575 399 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SLC3A1Q07837 685 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 ITGADQ13349 1161 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 SLC6A19Q695T7 634 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 KDM8Q8N371 416 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 RPL3LQ92901 407 aaKnown RBP8.53□□□□□ -1.04
SSR3-201ENST00000265044 LOXL4Q96JB6 756 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OR5M11Q96RB7 305 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 TAAR9Q96RI9 348 aa8.53□□□□□ -1.04
SSR3-201ENST00000265044 OR11A1Q9GZK7 315 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms