RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 NFATC1O95644 943 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 EML2O95834 649 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3HP0C7X1 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 CCL5P13501 91 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 POLR2CP19387 275 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 GBX2P52951 348 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 UBE2MP61081 183 aaKnown RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 ACSM1Q08AH1 577 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 FGL2Q14314 439 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 ZIC1Q15915 447 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 NDUFAF6Q330K2 333 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 AMZ1Q400G9 498 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 HSD17B12Q53GQ0 312 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM255AQ5JRV8 349 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 CD276Q5ZPR3 534 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3GQ6DHY5 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3CQ6IPX1 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF782Q6ZMW2 699 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 FCRLAQ7L513 359 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 ANKRD33Q7Z3H0 272 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3Q8IZP1 549 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 OR2T4Q8NH00 348 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 OR51Q1Q8NH59 317 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 CCL4L1Q8NHW4 92 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 C1orf216Q8TAB5 229 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 ELMOD3Q96FG2 381 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 NKX3-1Q99801 234 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 GINS4Q9BRT9 223 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 IL21RQ9HBE5 538 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 NOX4Q9NPH5 578 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 MEPEQ9NQ76 525 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBX21Q9UL17 535 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 IER3IP1Q9Y5U9 82 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 A0A087WV48 116 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 MEIS3P1A6NDR6 274 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 KLF4O43474 513 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 PLPP2O43688 288 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SELENOFO60613 162 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 TFP02787 698 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 EPXP11678 715 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 CPMP14384 443 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 NDUFS1P28331 727 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 TLX1P31314 330 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 PTGS2P35354 604 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 AP2S1P53680 142 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SHC2P98077 582 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 PITPNAQ00169 270 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 APOOLQ6UXV4 268 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 ASPGQ86U10 573 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 CMTM4Q8IZR5 234 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 OR52I2Q8NH67 350 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 COQ8AQ8NI60 647 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 ADAMTS14Q8WXS8 1223 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 NR4A3Q92570 626 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SMARCD2Q92925 531 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 WDR89Q96FK6 387 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 HHIPL1Q96JK4 782 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 PGLYRP3Q96LB9 341 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 ANKRD19PQ9H560 264 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 CERS4Q9HA82 394 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 KCNE5Q9UJ90 142 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SIX6O95475 246 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 HIST1H1CP16403 213 aaKnown RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 ANXA7P20073 488 aaKnown RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 RUNX2Q13950 521 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 CST6Q15828 149 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 RPE65Q16518 533 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF619Q8N2I2 560 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 LNX2Q8N448 690 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 GATSQ8NAP1 163 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 DNAAF1Q8NEP3 725 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 KCTD12Q96CX2 325 aaKnown RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SRMSQ9H3Y6 488 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 RPS6KB2Q9UBS0 482 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SIGLEC7Q9Y286 467 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SLC35A3Q9Y2D2 325 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 ARHGEF17Q96PE2 2063 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 SDK1Q7Z5N4 2213 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 A0A1W2PQU0 124 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 C7orf66A4D0T2 115 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 P2RX6O15547 441 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 FMO6PO60774 539 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 RASGRP1O95267 797 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 RAD52P43351 418 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 CAMK2DQ13557 499 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 ALG10BQ5I7T1 473 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 TCTE1Q5JU00 501 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 FAM78AQ5JUQ0 283 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 NLRC3Q7RTR2 1065 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 VN1R4Q7Z5H5 301 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 OR52B4Q8NGK2 314 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 BRIX1Q8TDN6 353 aaKnown RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 HSPA12BQ96MM6 686 aa11.44□□□□□ -0.58
CHMP3-201ENST00000263856 UBL7Q96S82 380 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-201ENST00000263856 B8ZZF3 427 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 B3GALT2O43825 422 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 RLN1P04808 185 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 UCHL1P09936 223 aa11.43□□□□□ -0.58
CHMP3-201ENST00000263856 NRG3P56975 720 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms