RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 APOOLQ6UXV4 268 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 ATCAYQ86WG3 371 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 EID2Q8N6I1 236 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 OR2T33Q8NG76 320 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 SLC2A12Q8TD20 617 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 NR4A3Q92570 626 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 ZNF559Q9BR84 538 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 RTN4RQ9BZR6 473 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 METTL15A6NJ78 407 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 PRODHO43272 600 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 GYPBP06028 91 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 ATP6V1E1P36543 226 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 ATP12AP54707 1039 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 SNRPD2P62316 118 aaKnown RBP12.47□□□□□ -0.41
VMP1-201ENST00000262291 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 OR8H2Q8N162 312 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 NANOGP1Q8N7R0 232 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 C9orf43Q8TAL5 461 aaPredicted RBP12.47□□□□□ -0.41
VMP1-201ENST00000262291 ART5Q96L15 291 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 HS6ST2Q96MM7 605 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 RAB33BQ9H082 229 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.47□□□□□ -0.41
VMP1-201ENST00000262291 SERTAD3Q9UJW9 196 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 FBXL4Q9UKA2 621 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 PCDHGB6Q9Y5F9 930 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 DSCR3O14972 297 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 POLR1CO15160 346 aaPredicted RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 PPP1R3DO95685 299 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 TBXA2RP21731 343 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 EPHA8P29322 1005 aaPredicted RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 S100A5P33763 92 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 C19orf57Q0VDD7 668 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 FGFBP1Q14512 234 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 ZNF791Q3KP31 576 aaPredicted RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 MEDAGQ5VYS4 303 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 POMZP3Q6PJE2 187 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 CYP4Z2PQ8N1L4 340 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 PHOSPHO1Q8TCT1 267 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 THAP3Q8WTV1 239 aaPredicted RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 ZNF501Q96CX3 271 aaPredicted RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 TAPBPLQ9BX59 468 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 RACGAP1Q9H0H5 632 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 OR51V1Q9H2C8 321 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 RPS6KB2Q9UBS0 482 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 NUFIP1Q9UHK0 495 aaKnown RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 GMEB2Q9UKD1 530 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 SPIN1Q9Y657 262 aaPredicted RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 MPDZO75970 2070 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 ALPK2Q86TB3 2170 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 SERINC4A6NH21 518 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 NPIPB9F8W1W9 429 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 KHNYNO15037 678 aaKnown RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 DDAH2O95865 285 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.41
VMP1-201ENST00000262291 NOS3P29474 1203 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 DEFA1P59665 94 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 DEFA3P59666 94 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 SERTAD2Q14140 314 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 YIF1BQ5BJH7 314 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 OR51G2Q8NGK0 314 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 GRPEL2Q8TAA5 225 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 SLC41A2Q96JW4 573 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 KCNS3Q9BQ31 491 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 MND1Q9BWT6 205 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 TTTY10Q9BZA0 68 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 MMP28Q9H239 520 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 MMP27Q9H306 513 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 POLHQ9Y253 713 aa12.46□□□□□ -0.41
VMP1-201ENST00000262291 LY6G6EA0A0G2JKS1 128 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 B8ZZF3 427 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 REM1O75628 298 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 SERPINI2O75830 405 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 HPGDP15428 266 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 MYL12AP19105 171 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 ENPP1P22413 925 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 PTGS2P35354 604 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 NR0B1P51843 470 aaKnown RBP12.46□□□□□ -0.42
VMP1-201ENST00000262291 RHAGQ02094 409 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 MXD1Q05195 221 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 PRKCDQ05655 676 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 AADACL4Q5VUY2 407 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 ZNF517Q6ZMY9 492 aaPredicted RBP12.46□□□□□ -0.42
VMP1-201ENST00000262291 CXXC5Q7LFL8 322 aaKnown RBP12.46□□□□□ -0.42
VMP1-201ENST00000262291 BMP8AQ7Z5Y6 402 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 CDK20Q8IZL9 346 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 ADAMTS18Q8TE60 1221 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 TM9SF4Q92544 642 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 ATOH1Q92858 354 aaPredicted RBP12.46□□□□□ -0.42
VMP1-201ENST00000262291 OR6C1Q96RD1 312 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 G6PC3Q9BUM1 346 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 SLA2Q9H6Q3 261 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 GAREM1Q9H706 876 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 SLC22A11Q9NSA0 550 aa12.46□□□□□ -0.42
VMP1-201ENST00000262291 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.42
VMP1-201ENST00000262291 U3KQA8 63 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms