RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SNNO75324 88 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TGFB1P01137 390 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 SFTA3P0C7M3 94 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CXCL8P10145 99 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 GABRB1P18505 474 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TBPP20226 339 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 PSMB1P20618 241 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 USF1P22415 310 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 PPIBP23284 216 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 HTR1EP28566 365 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 KIR3DL2P43630 455 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TPPP2P59282 170 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TAS2R19P59542 299 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MEF2AQ02078 507 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MRPL49Q13405 166 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 PRAMEF8Q5VWM4 474 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 PRAMEF7Q5VXH5 474 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TSEN54Q7Z6J9 526 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 OR5D18Q8NGL1 313 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 OR51Q1Q8NH59 317 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 UBA3Q8TBC4 463 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MRPL45Q9BRJ2 306 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM208Q9BTX3 173 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 SLIRPQ9GZT3 109 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 BTAF1O14981 1849 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM150BA6NC51 233 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TRDCB7Z8K6 153 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 CBR3O75828 277 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 RBMS1P29558 406 aaKnown RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC6A8P48029 635 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PLK1P53350 603 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 OR12D2P58182 307 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SPIN4Q56A73 249 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 FFAR4Q5NUL3 377 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PIP5KL1Q5T9C9 394 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 LFNGQ8NES3 379 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 STEAP2Q8NFT2 490 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PPTC7Q8NI37 304 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SPACA9Q96E40 222 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 DPH1Q9BZG8 443 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PRDM12Q9H4Q4 367 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 IL21RQ9HBE5 538 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM212BQ9NTI7 297 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 LRP5O75197 1615 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 LRP5LA4QPB2 252 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 DNASE2O00115 360 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 UBE2CO00762 179 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 HCRTR2O43614 444 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 FZD7O75084 574 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 ARG1P05089 322 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 IL12BP29460 328 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TAS2R38P59533 333 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 BAXQ07812 192 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM110CQ1W6H9 321 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SMIM21Q3B7S5 101 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 CARD17Q5XLA6 110 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 KMT5CQ86Y97 462 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 B3GALNT2Q8NCR0 500 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 RXFP3Q9NSD7 469 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 CISHQ9NSE2 258 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 FKBP11Q9NYL4 201 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TRAPPC2LH3BP13 241 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 MASP2O00187 686 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SYT7O43581 403 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 CREG1O75629 220 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TEAD1P28347 426 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 UGCGQ16739 394 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 BAGE2Q86Y30 109 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 AQP11Q8NBQ7 271 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF439Q8NDP4 499 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 CASTOR1Q8WTX7 329 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 MS4A10Q96PG2 267 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF300Q96RE9 604 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TEX101Q9BY14 249 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 NMRK2Q9NPI5 230 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 FBXL12Q9NXK8 326 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 OBP2AQ9NY56 170 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PITPNC1Q9UKF7 332 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 NRP1O14786 923 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TOX3O15405 576 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 HAND1O96004 215 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 GGT1P19440 569 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 NME2P22392 152 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 HLXQ14774 488 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 B3GNT8Q7Z7M8 397 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 BEND2Q8NDZ0 799 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 OR13D1Q8NGV5 346 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 ST6GALNAC4Q9H4F1 302 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SIRT3Q9NTG7 399 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 OR6C3Q9NZP0 311 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TBC1D29Q9UFV1 150 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 FKBPLQ9UIM3 349 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SRPK3Q9UPE1 567 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 AK6Q9Y3D8 172 aaKnown RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 UNC119BA6NIH7 251 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 EEF1E1-BLOC1S5C9J1V9 151 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PIRO00625 290 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 NME2P1O60361 137 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms