RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PRAMEF7Q5VXH5 474 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 CGB2Q6NT52 195 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 C22orf34Q6ZV56 151 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 ZNF550Q7Z398 422 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 RETREG3Q86VR2 466 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 ZNF440Q8IYI8 595 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 SLC43A2Q8N370 569 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 CPPED1Q9BRF8 314 aaPredicted RBP20.44■□□□□ 0.86
LSM4-201ENST00000252816 RSPO3Q9BXY4 272 aaPredicted RBP20.44■□□□□ 0.86
LSM4-201ENST00000252816 LIME1Q9H400 295 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 GP6Q9HCN6 339 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.44■□□□□ 0.86
LSM4-201ENST00000252816 ITGB1BP2Q9UKP3 347 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 TMED7Q9Y3B3 224 aa20.44■□□□□ 0.86
LSM4-201ENST00000252816 SPIN1Q9Y657 262 aaPredicted RBP20.44■□□□□ 0.86
LSM4-201ENST00000252816 SULT2B1O00204 365 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 CYTIPO60759 359 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 FESP07332 822 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 YES1P07947 543 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 PRG2P13727 222 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 HTR3AP46098 478 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 POLR2HP52434 150 aaKnown RBP20.43■□□□□ 0.86
LSM4-201ENST00000252816 SF3A3Q12874 501 aaKnown RBP eCLIP20.43■□□□□ 0.86
LSM4-201ENST00000252816 POU4F3Q15319 338 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 TMEM201Q5SNT2 666 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 METTL21CQ5VZV1 264 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 NFKBIDQ8NI38 313 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 BBS10Q8TAM1 723 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 PSD2Q9BQI7 771 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 SPATA9Q9BWV2 254 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 KLHL4Q9C0H6 718 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 ADAM19Q9H013 955 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 BCO1Q9HAY6 547 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 LEF1Q9UJU2 399 aaPredicted RBP20.43■□□□□ 0.86
LSM4-201ENST00000252816 ZNF232Q9UNY5 417 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 NDUFAF1Q9Y375 327 aa20.43■□□□□ 0.86
LSM4-201ENST00000252816 TMEM72A0PK05 275 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 C5orf58C9J3I9 102 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 HRGP04196 525 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 GPX2P18283 190 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 DNAJA1P31689 397 aaKnown RBP20.42■□□□□ 0.86
LSM4-201ENST00000252816 CSNK2A1P68400 391 aaPredicted RBP20.42■□□□□ 0.86
LSM4-201ENST00000252816 RASGEF1BQ0VAM2 473 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 ADRM1Q16186 407 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 RUNDC3AQ59EK9 446 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 ZNF311Q5JNZ3 666 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 ANKRD34AQ69YU3 496 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 TFAP2EQ6VUC0 442 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 STAC2Q6ZMT1 411 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 DPP10Q8N608 796 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 MED18Q9BUE0 208 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 KLHL9Q9P2J3 617 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 IFT52Q9Y366 437 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 HDGFL3Q9Y3E1 203 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 CELSR1Q9NYQ6 3014 aa20.42■□□□□ 0.86
LSM4-201ENST00000252816 A0A1W2PPR1 153 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 ZC3H12DA2A288 527 aaKnown RBP20.41■□□□□ 0.86
LSM4-201ENST00000252816 CASKO14936 926 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 SIAH2O43255 324 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 PMS2P2O95744 297 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 TROVE2P10155 538 aaKnown RBP eCLIP20.41■□□□□ 0.86
LSM4-201ENST00000252816 UQCRBP14927 111 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 FKBP2P26885 142 aaKnown RBP20.41■□□□□ 0.86
LSM4-201ENST00000252816 CLK1P49759 484 aaKnown RBP20.41■□□□□ 0.86
LSM4-201ENST00000252816 CDK6Q00534 326 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 ZSWIM7Q19AV6 140 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 HSP90B2PQ58FF3 399 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 FBXW10Q5XX13 1052 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 BEND4Q6ZU67 534 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 DHDDSQ86SQ9 333 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 SERPINA11Q86U17 422 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 MTDHQ86UE4 582 aaKnown RBP20.41■□□□□ 0.86
LSM4-201ENST00000252816 STK32CQ86UX6 486 aa20.41■□□□□ 0.86
LSM4-201ENST00000252816 ZNF775Q96BV0 537 aaPredicted RBP20.41■□□□□ 0.86
LSM4-201ENST00000252816 ZNF300Q96RE9 604 aaPredicted RBP20.41■□□□□ 0.86
LSM4-201ENST00000252816 CACYBPQ9HB71 228 aaKnown RBP20.41■□□□□ 0.86
LSM4-201ENST00000252816 EVPLLA8MZ36 301 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 ANGPT2O15123 496 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 ZNF208O43345 1280 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 FRS3O43559 492 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 GOSR1O95249 250 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 VIMP08670 466 aaKnown RBP20.4■□□□□ 0.86
LSM4-201ENST00000252816 ETS2P15036 469 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 SELPLGQ14242 412 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 FREM1Q5H8C1 2179 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 ABLIM2Q6H8Q1 611 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 COMTD1Q86VU5 262 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 CADM2Q8N3J6 435 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 TSPEARQ8WU66 669 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 CGREF1Q99674 301 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 TMEM38AQ9H6F2 299 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 MED4Q9NPJ6 270 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 C6orf203Q9P0P8 240 aaPredicted RBP20.4■□□□□ 0.86
LSM4-201ENST00000252816 CORO2BQ9UQ03 480 aa20.4■□□□□ 0.86
LSM4-201ENST00000252816 DEFB108AA8MXU0 73 aa20.39■□□□□ 0.85
LSM4-201ENST00000252816 ZNF814B7Z6K7 855 aa20.39■□□□□ 0.85
LSM4-201ENST00000252816 IMPDH2P12268 514 aa20.39■□□□□ 0.85
LSM4-201ENST00000252816 EDNRAP25101 427 aa20.39■□□□□ 0.85
LSM4-201ENST00000252816 ARFIP2P53365 341 aa20.39■□□□□ 0.85
LSM4-201ENST00000252816 OR2B6P58173 313 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms