RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 KRBOX4Q5JUW0 171 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 CPTPQ5TA50 214 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 C11orf88Q6PI97 169 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 PAPD4Q6PIY7 484 aaKnown RBP12.07□□□□□ -0.48
MSH2-201ENST00000233146 ANKRD33Q7Z3H0 272 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 PRSS35Q8N3Z0 413 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 MTMR14Q8NCE2 650 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 FCRL2Q96LA5 508 aaPredicted RBP12.07□□□□□ -0.48
MSH2-201ENST00000233146 BCO1Q9HAY6 547 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 FAM86C1Q9NVL1 165 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 A0A1W2PPH5 198 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 G3V3G9 751 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 MOSPD3O75425 235 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 CRYABP02511 175 aaKnown RBP12.07□□□□□ -0.48
MSH2-201ENST00000233146 MMP11P24347 488 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 CLN3Q13286 438 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 EIF4EBP2Q13542 120 aaPredicted RBP12.07□□□□□ -0.48
MSH2-201ENST00000233146 ALG11Q2TAA5 492 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 MST1LQ2TV78 715 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 GGTA1PQ4G0N0 100 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 ANXA8L1Q5VT79 327 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 ADAM5Q6NVV9 412 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 OR51S1Q8NGJ8 323 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 TNFAIP8L1Q8WVP5 186 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 ING5Q8WYH8 240 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 HMCESQ96FZ2 354 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 TCTN2Q96GX1 697 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 SEMA3CQ99985 751 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 MED10Q9BTT4 135 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 PLA2G12AQ9BZM1 189 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 TIMM10BQ9Y5J6 103 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 TSPAN3O60637 253 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 NME6O75414 186 aaPredicted RBP12.06□□□□□ -0.48
MSH2-201ENST00000233146 STK16O75716 305 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 PMP2P02689 132 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SLC25A4P12235 298 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 DCTDP32321 178 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 GABREP78334 506 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 UBE2NLQ5JXB2 153 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 LY6G6FQ5SQ64 297 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 DNAJB7Q7Z6W7 309 aaPredicted RBP12.06□□□□□ -0.48
MSH2-201ENST00000233146 ABHD4Q8TB40 342 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 FCAMRQ8WWV6 532 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SMARCD1Q96GM5 515 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 GPA33Q99795 319 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SMOC1Q9H4F8 434 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 RPS10P5Q9NQ39 176 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SIRT7Q9NRC8 400 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ZMIZ1Q9ULJ6 1067 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
MSH2-201ENST00000233146 GGT3PA6NGU5 568 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SULT2B1O00204 365 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 GPR182O15218 404 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ITGA5P08648 1049 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 PLA2G7Q13093 441 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 BEX5Q5H9J7 111 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 CDC73Q6P1J9 531 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 FIGNL1Q6PIW4 674 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ACOT7LQ6ZUV0 252 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 CXXC5Q7LFL8 322 aaKnown RBP12.06□□□□□ -0.48
MSH2-201ENST00000233146 OR10D4PQ8NGN7 298 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 OR56A3Q8NH54 315 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SLC25A38Q96DW6 304 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 MED8Q96G25 268 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SMOQ99835 787 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 MAN2C1Q9NTJ4 1040 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 CACFD1Q9UGQ2 172 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
MSH2-201ENST00000233146 FBXL4Q9UKA2 621 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ZDHHC8Q9ULC8 765 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SERTM1A2A2V5 107 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 UGDHO60701 494 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 KLHL18O94889 574 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 IGLV3-25P01717 112 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ARAFP10398 606 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 CCL23P55773 120 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 SLC26A5P58743 744 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 FKBP1AP62942 108 aaKnown RBP12.06□□□□□ -0.48
MSH2-201ENST00000233146 TOMM20Q15388 145 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 CAMKMTQ7Z624 323 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 TEX19Q8NA77 164 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ZNF461Q8TAF7 563 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 RFKQ969G6 155 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 R3HDM4Q96D70 268 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 LRIG1Q96JA1 1093 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 LRFN5Q96NI6 719 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ATG101Q9BSB4 218 aa12.06□□□□□ -0.48
MSH2-201ENST00000233146 ZNF230Q9UIE0 474 aaPredicted RBP12.06□□□□□ -0.48
MSH2-201ENST00000233146 PIRO00625 290 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 SEPT4O43236 478 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 IFNA17P01571 189 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 CD74P04233 296 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 CRHP06850 196 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
MSH2-201ENST00000233146 OR8G3PP0DMU2 310 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 AHRP35869 848 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 PTGER3P43115 390 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 CACNG1Q06432 222 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms