RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TRANK1O15050 2925 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 A0A0A6YYC8 382 aaPredicted RBP20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 I3L1I5 382 aaPredicted RBP20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 DVL2O14641 736 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 PSKH1P11801 424 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 TYRP1P17643 537 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 OR12D2P58182 307 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 BIKQ13323 160 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 KIRREL2Q6UWL6 708 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 NOXA1Q86UR1 476 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 Q8N9G6 341 aaPredicted RBP20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 CYB561A3Q8NBI2 242 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 RCBTB1Q8NDN9 531 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 OR4N2Q8NGD1 307 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 OR52E2Q8NGJ4 325 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 UBASH3BQ8TF42 649 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 TCTN2Q96GX1 697 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 PELOQ9BRX2 385 aaKnown RBP20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 SLC19A3Q9BZV2 496 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 ST6GALNAC2Q9UJ37 374 aa20.21■□□□□ 0.83
SMARCD2-201ENST00000225742 A0A0G2JK05 382 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ANKRD61A6NGH8 418 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ZNF749O43361 778 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ADAM11O75078 769 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 NSA2O95478 260 aaKnown RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 PITPNBP48739 271 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 GBX2P52951 348 aaPredicted RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 BTG1P62324 171 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 CCINQ13939 588 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 FAM53BQ14153 422 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 TATDN3Q17R31 274 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ACSM3Q53FZ2 586 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 SLC35D3Q5M8T2 416 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 NPSR1Q6W5P4 371 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 CADM2Q8N3J6 435 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 FAM98AQ8NCA5 519 aaKnown RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 NLGN4YQ8NFZ3 816 aaPredicted RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 CREB3L1Q96BA8 519 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 RNF170Q96K19 258 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 TRAF4Q9BUZ4 470 aaPredicted RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 PPIL3Q9H2H8 161 aaKnown RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 UCK1Q9HA47 277 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 RASD1Q9Y272 281 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 A0A087WUJ7 227 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 SERINC4A6NH21 518 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 FAM47E-STBD1D6RA91 191 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ARPC3O15145 178 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 FOXS1O43638 330 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 IGF2P01344 180 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 CLUP10909 449 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 GPR3P46089 330 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 FUT7Q11130 342 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 MADCAM1Q13477 382 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 DEFB110Q30KQ9 67 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ZNF542PQ5EBM4 170 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ZNF57Q68EA5 555 aaPredicted RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 PYHIN1Q6K0P9 492 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 ZNF761Q86XN6 746 aaPredicted RBP20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 UBE2J2Q8N2K1 259 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 PHYHIPQ92561 330 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 RFT1Q96AA3 541 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 MSANTD3Q96H12 275 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 DMRTB1Q96MA1 342 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 HCN3Q9P1Z3 774 aa20.2■□□□□ 0.82
SMARCD2-201ENST00000225742 A0A0G2JMP0 313 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 A0A0X1KG70 313 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 SLC9B1P1A6NJY1 282 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 TGFBR3LH3BV60 316 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 GATBO75879 557 aaKnown RBP20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 PYCR1P32322 319 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 HSF2Q03933 536 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 ZNF267Q14586 743 aaPredicted RBP20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 CDONQ4KMG0 1287 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 PARGQ86W56 976 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 SAMD12Q8N8I0 201 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 OR4M2Q8NGB6 313 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 OR4M1Q8NGD0 313 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 OR5J2Q8NH18 312 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 GHSRQ92847 366 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 KLHDC7BQ96G42 594 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 TOE1Q96GM8 510 aaKnown RBP20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 PEX11GQ96HA9 241 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 ZNF285Q96NJ3 590 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 HDHD2Q9H0R4 259 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 ZCCHC4Q9H5U6 513 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 RANGRFQ9HD47 186 aaPredicted RBP20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 ABRACLQ9P1F3 81 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 ZNF337Q9Y3M9 751 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 ALG5Q9Y673 324 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 TMEM131Q92545 1883 aa20.19■□□□□ 0.82
SMARCD2-201ENST00000225742 A8MV72 311 aaPredicted RBP20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 ARL6IP5O75915 188 aa20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 EIF4EP06730 217 aaKnown RBP20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 HIST1H1CP16403 213 aaKnown RBP20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 RAB3BP20337 219 aa20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 RCVRNP35243 200 aa20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 DIO1P49895 249 aa20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 HSD17B7P56937 341 aa20.18■□□□□ 0.82
SMARCD2-201ENST00000225742 RAB25P57735 213 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms