RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TMEM255BQ8WV15 326 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 TMEM239Q8WW34 195 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 UBL7Q96S82 380 aaPredicted RBP12.69□□□□□ -0.38
SEC61B-201ENST00000223641 BARD1Q99728 777 aaKnown RBP12.69□□□□□ -0.38
SEC61B-201ENST00000223641 PIGQQ9BRB3 760 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 SLC25A18Q9H1K4 315 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 MEPEQ9NQ76 525 aaPredicted RBP12.69□□□□□ -0.38
SEC61B-201ENST00000223641 SELENONQ9NZV5 590 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 OAZ3Q9UMX2 235 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 TMED7Q9Y3B3 224 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 MPDZO75970 2070 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 USP24Q9UPU5 2620 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 TMEM72A0PK05 275 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 ELOA3DA6NLF2 546 aaPredicted RBP12.68□□□□□ -0.38
SEC61B-201ENST00000223641 FAM166BA8MTA8 275 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 SHISA8B8ZZ34 492 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 G3V2T6 193 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 LINC01387J3KSC0 135 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 E2F6O75461 281 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 IGHG3P01860 377 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 CELA3AP09093 270 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 CHMP24386 653 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 CXCR1P25024 350 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 GCKP35557 465 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 UGT2B15P54855 530 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 CTBP2P56545 445 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 ELOA3BQ3SY89 546 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 FGD3Q5JSP0 725 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 WIPI1Q5MNZ9 446 aaPredicted RBP12.68□□□□□ -0.38
SEC61B-201ENST00000223641 FBXW10Q5XX13 1052 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 TTC33Q6PID6 262 aaPredicted RBP12.68□□□□□ -0.38
SEC61B-201ENST00000223641 TBPL2Q6SJ96 375 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 MBOAT2Q6ZWT7 520 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 YRDCQ86U90 279 aaKnown RBP12.68□□□□□ -0.38
SEC61B-201ENST00000223641 HIPK1Q86Z02 1210 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 ZDHHC13Q8IUH4 622 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 SIAH3Q8IW03 269 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 ELOA3Q8NG57 546 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 OR4K5Q8NGD3 323 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 STK35Q8TDR2 534 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 GABARAPL1Q9H0R8 117 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 RASSF4Q9H2L5 321 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 CHRNA9Q9UGM1 479 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 TMCC3Q9ULS5 477 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 RPH3AQ9Y2J0 694 aaPredicted RBP12.68□□□□□ -0.38
SEC61B-201ENST00000223641 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
SEC61B-201ENST00000223641 PIEZO2Q9H5I5 2752 aa12.68□□□□□ -0.38
SEC61B-201ENST00000223641 NBEAQ8NFP9 2946 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 A8MVM7 634 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 SUSD5O60279 629 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 FZD7O75084 574 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 TRAPPC6AO75865 159 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF23P17027 643 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF24P17028 368 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 IL11P20809 199 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 CLK1P49759 484 aaKnown RBP12.67□□□□□ -0.38
SEC61B-201ENST00000223641 ARHGDIAP52565 204 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 RAC1P63000 192 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 PRKCDQ05655 676 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 SELENBP1Q13228 472 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 LAPTM4AQ15012 233 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 TOMM20Q15388 145 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 ST3GAL2Q16842 350 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 CMPK2Q5EBM0 449 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 OGFRL1Q5TC84 451 aaPredicted RBP12.67□□□□□ -0.38
SEC61B-201ENST00000223641 RAET1LQ5VY80 246 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 C3orf33Q6P1S2 294 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 C1orf94Q6P1W5 598 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 C5orf46Q6UWT4 87 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 ZER1Q7Z7L7 766 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 HS3ST5Q8IZT8 346 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 ICA1LQ8NDH6 482 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 OR5M1Q8NGP8 315 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 OR14L1PQ8NHC6 308 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 GIPC3Q8TF64 312 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 SLC25A43Q8WUT9 341 aaPredicted RBP12.67□□□□□ -0.38
SEC61B-201ENST00000223641 OSBPL10Q9BXB5 764 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 PLSCR2Q9NRY7 297 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 MED31Q9Y3C7 131 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF337Q9Y3M9 751 aa12.67□□□□□ -0.38
SEC61B-201ENST00000223641 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 ZC3H12DA2A288 527 aaKnown RBP12.66□□□□□ -0.38
SEC61B-201ENST00000223641 SAC3D1A6NKF1 404 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 KLF4O43474 513 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 CCNB2O95067 398 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 PRKACGP22612 351 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 CBLP22681 906 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 OMPP47874 163 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 PPP2R2BQ00005 443 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF324BQ6AW86 544 aaPredicted RBP12.66□□□□□ -0.38
SEC61B-201ENST00000223641 PPP4R4Q6NUP7 873 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 PGBD2Q6P3X8 592 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 FAHD1Q6P587 224 aa12.66□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF730Q6ZMV8 503 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms