RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PLSCR2Q9NRY7 297 aa24.59■■□□□ 1.53
CHMP4B-201ENST00000217402 BMP7P18075 431 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 CHMP24386 653 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 SFTPDP35247 375 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 TDGF1P3P51864 188 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 ELF3P78545 371 aaPredicted RBP24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.58■■□□□ 1.535e-7■■□□□ 12.4
CHMP4B-201ENST00000217402 FGD3Q5JSP0 725 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 OR2T5Q6IEZ7 315 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 ZFP1Q6P2D0 407 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 P3H2Q8IVL5 708 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 OR2T29Q8NH02 315 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 CPT1CQ8TCG5 803 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 ABTB1Q969K4 478 aaPredicted RBP24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 DNAJA3Q96EY1 480 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 SLX1AQ9BQ83 275 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 OR11A1Q9GZK7 315 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 C12orf10Q9HB07 376 aa24.58■■□□□ 1.53
CHMP4B-201ENST00000217402 A0A087WUJ7 227 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 A0A1B0GTH9 108 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 H3BNX3 289 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 KRT36O76013 467 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 THRBP10828 461 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 SHC1P29353 583 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 TRAM2Q15035 370 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 UBQLNLQ8IYU4 475 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 TMEM255BQ8WV15 326 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 SPIN1Q9Y657 262 aaPredicted RBP24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 ZNF407Q9C0G0 2248 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 H0YHG0 523 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 SEC14L5O43304 696 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 GADD45GO95257 159 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 ARHGAP11AQ6P4F7 1023 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 GHDCQ8N2G8 530 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 MPP4Q96JB8 637 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 S100A14Q9HCY8 104 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 VNN3Q9NY84 501 aa24.57■■□□□ 1.52
CHMP4B-201ENST00000217402 A0A1B0GVC2 190 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 ZC3H12DA2A288 527 aaKnown RBP24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 LINC01387J3KSC0 135 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 GNGT2O14610 69 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 ADAMDEC1O15204 470 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 HNRNPRO43390 633 aaKnown RBP24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 ACTL6AO96019 429 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 PRB1P04280 392 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 TFPIP10646 304 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 RAC1P63000 192 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 PPP1R8Q12972 351 aaKnown RBP24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 KRTCAP3Q53RY4 240 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 VASNQ6EMK4 673 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 DHRS1Q96LJ7 313 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 BARD1Q99728 777 aaKnown RBP24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 U3KQV3 271 aa24.56■■□□□ 1.52
CHMP4B-201ENST00000217402 IGKV1D-42A0A075B6H8 117 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 TRBV4-1A0A0J9YWV2 114 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 A0A1W2PRQ8 180 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 KPNA4O00629 521 aaPredicted RBP24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 AQP7O14520 342 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 LHX2P50458 406 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 CLDN20P56880 219 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 CRYZQ08257 329 aaKnown RBP24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 DGCR6Q14129 220 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 C3AR1Q16581 482 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 TMEM176BQ3YBM2 270 aaPredicted RBP24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 SYT14P1Q58G82 188 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 NHSL2Q5HYW2 709 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 LINC00114Q6XXX2 140 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 LRTOMTQ8WZ04 291 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 REEP1Q9H902 201 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 AP4B1Q9Y6B7 739 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 KALRNO60229 2985 aa24.55■■□□□ 1.52
CHMP4B-201ENST00000217402 NPIPA2E9PIF3 369 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 NPIPA3F8WFD2 350 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 H0YC42 278 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 FASP25445 335 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 TPD52P55327 224 aaPredicted RBP24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 SMIM11AP58511 58 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 SRYQ05066 204 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 TTC33Q6PID6 262 aaPredicted RBP24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 SLC7A13Q8TCU3 470 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 SLC25A43Q8WUT9 341 aaPredicted RBP24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 DDIT4LQ96D03 193 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 TIMP4Q99727 224 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 DNAJB9Q9UBS3 223 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 SAMHD1Q9Y3Z3 626 aaKnown RBP24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 LYVE1Q9Y5Y7 322 aa24.54■■□□□ 1.52
CHMP4B-201ENST00000217402 A8MVM7 634 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 TNFRSF11BO00300 401 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 CLOCKO15516 846 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 ZNF208O43345 1280 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 FCGR1AP12314 374 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 EGR4Q05215 589 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 C19orf57Q0VDD7 668 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 PODNL1Q6PEZ8 512 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 FGD2Q7Z6J4 655 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 TMEM239Q8WW34 195 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 ARL5BQ96KC2 179 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 OR5B2Q96R09 309 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 ZNF426Q9BUY5 554 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 ANKRD19PQ9H560 264 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms