RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TRIM61Q5EBN2 209 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 OR6T1Q8NGN1 323 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 MRPL38Q96DV4 380 aaKnown RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 THAP7Q9BT49 309 aaPredicted RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 HDAC8Q9BY41 377 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 TBC1D29Q9UFV1 150 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 OR1D5P58170 312 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 SLC6A19Q695T7 634 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 LINC00696Q6ZRV3 163 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 MED25Q71SY5 747 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 ZNF595Q8IYB9 648 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 SLC2A12Q8TD20 617 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 LINC01599Q8WXQ3 324 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 TAS2R8Q9NYW2 309 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 PGAP2Q9UHJ9 254 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 DVL2O14641 736 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 AFF3P51826 1226 aaKnown RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 FGL2Q14314 439 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 MLF2Q15773 248 aaPredicted RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 HENMT1Q5T8I9 393 aaKnown RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 SLC22A10Q63ZE4 541 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 ELP2Q6IA86 826 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 TLDC1Q6P9B6 456 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 MEX3BQ6ZN04 569 aaKnown RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 ADIPOR2Q86V24 386 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 SENP5Q96HI0 755 aaPredicted RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 NIPSNAP1Q9BPW8 284 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 PRDM9Q9NQV7 894 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 EIF2S3P41091 472 aaKnown RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 CAV2P51636 162 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 FAM83HQ6ZRV2 1179 aaPredicted RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 GLYATL2Q8WU03 294 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 NMNAT3Q96T66 252 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 CCDC86Q9H6F5 360 aaKnown RBP17.53■□□□□ 0.4
MBD3-201ENST00000156825 PLPP1O14494 284 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 TSPAN31Q12999 210 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 MYADMQ96S97 322 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 HHLA2Q9UM44 414 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 MED16Q9Y2X0 877 aa17.53■□□□□ 0.4
MBD3-201ENST00000156825 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.52■□□□□ 0.4
MBD3-201ENST00000156825 UPK1BO75841 260 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 REEP5Q00765 189 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 GAB1Q13480 694 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 ABHD17CQ6PCB6 329 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 PAPD4Q6PIY7 484 aaKnown RBP17.52■□□□□ 0.4
MBD3-201ENST00000156825 GDPGP1Q6ZNW5 385 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 COX15Q7KZN9 410 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 RBM45Q8IUH3 476 aaKnown RBP17.52■□□□□ 0.4
MBD3-201ENST00000156825 TMEM255BQ8WV15 326 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 SAGE1Q9NXZ1 904 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 V9GY05 133 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 FUOMA2VDF0 154 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 ADARB1P78563 741 aaKnown RBP17.52■□□□□ 0.4
MBD3-201ENST00000156825 ZNF77Q15935 545 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 NANOS1Q8WY41 292 aaKnown RBP17.52■□□□□ 0.4
MBD3-201ENST00000156825 ADAM29Q9UKF5 820 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 TMPRSS11EQ9UL52 423 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 A0A0G2JMP0 313 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 CER1O95813 267 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 MT-ND4P03905 459 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 SERPINA2P20848 420 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 KCNAB1Q14722 419 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 ACBD4Q8NC06 268 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 OR4M2Q8NGB6 313 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 TSNAXQ99598 290 aaKnown RBP17.52■□□□□ 0.4
MBD3-201ENST00000156825 FOXQ1Q9C009 403 aa17.52■□□□□ 0.4
MBD3-201ENST00000156825 A0A1W2PQ09 198 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 CENPBD1B2RD01 187 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 ZNF736B4DX44 427 aaPredicted RBP17.52■□□□□ 0.39
MBD3-201ENST00000156825 PTPN6P29350 595 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 TNFSF8P32971 234 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 NUDT1P36639 197 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 RSC1A1Q92681 617 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 TCEAL3Q969E4 200 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 ENKD1Q9H0I2 346 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 CAMK2AQ9UQM7 478 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 ANKRD28O15084 1053 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 SUSD5O60279 629 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 ACP2P11117 423 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 HTR2BP41595 481 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 TMEM102Q8N9M5 508 aaPredicted RBP17.52■□□□□ 0.39
MBD3-201ENST00000156825 PIGCQ92535 297 aa17.52■□□□□ 0.39
MBD3-201ENST00000156825 GFRA2O00451 464 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 PRKNO60260 465 aaPredicted RBP17.51■□□□□ 0.39
MBD3-201ENST00000156825 SPDEFO95238 335 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 PTTG1O95997 202 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 PTHP01270 115 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 SLC5A2P31639 672 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 MELKQ14680 651 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 OPN5Q6U736 354 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 FAM57BQ71RH2 274 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 CCL4L1Q8NHW4 92 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 TMEM68Q96MH6 324 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 B4GALT3O60512 393 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 TFAP2AP05549 437 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 PDE7AQ13946 482 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 CRMP1Q14194 572 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 DPY19L4Q7Z388 723 aa17.51■□□□□ 0.39
MBD3-201ENST00000156825 KDM8Q8N371 416 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms