RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 MRPS14O60783 128 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 FCER2P06734 321 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 WNT4P56705 351 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 RAB40BQ12829 278 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 TMEM92Q6UXU6 159 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 MARCH3Q86UD3 253 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 MFSD8Q8NHS3 518 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 INPP5EQ9NRR6 644 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 MED11Q9P086 117 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 C19orf53Q9UNZ5 99 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 STT3AP46977 705 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 DEFB109BQ30KR1 87 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF750Q32MQ0 723 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 PLEKHN1Q494U1 663 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC36A2Q495M3 483 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 VWA2Q5GFL6 755 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF417Q8TAU3 575 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 RFT1Q96AA3 541 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 DDX31Q9H8H2 851 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 CALHM2Q9HA72 323 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ANKRD31Q8N7Z5 1873 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 LOC105369274A0A096LPK9 316 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 TVP23AA6NH52 213 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 FCGR2AP12318 317 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 C9orf135Q5VTT2 229 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 VASNQ6EMK4 673 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF613Q6PF04 617 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 BEND4Q6ZU67 534 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 OR4N4Q8N0Y3 316 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 THAP6Q8TBB0 222 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 POTEKPQ9BYX7 375 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 OR51B6Q9H340 312 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 SLAMF8Q9P0V8 285 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF223Q9UK11 482 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ADAMTSL1Q8N6G6 1762 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 A8MVM7 634 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 STMND1H3BQB6 276 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 DENRO43583 198 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 MT-CO3P00414 261 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 F13BP05160 661 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 HOXC4P09017 264 aaPredicted RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 MTHFD2P13995 350 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 SELPLGQ14242 412 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 UTS2BQ765I0 119 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ASRGL1Q7L266 308 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 OLIG1Q8TAK6 271 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 TMEM38AQ9H6F2 299 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 RABL2AQ9UBK7 228 aaPredicted RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 RABL2BQ9UNT1 228 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 PPIL1Q9Y3C6 166 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 SCGB2A1O75556 95 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 MSL3P1P0C860 447 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 CD22P20273 847 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 MAGEA2P43356 314 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 GABREP78334 506 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 MEPCEQ7L2J0 689 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 MEX3DQ86XN8 651 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 CA13Q8N1Q1 262 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 OR5W2Q8NH69 310 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 FBXO27Q8NI29 283 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 TMEM163Q8TC26 289 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 QRSL1Q9H0R6 528 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 YARS2Q9Y2Z4 477 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF175Q9Y473 711 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 OR51B4Q9Y5P0 310 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF587BE7ETH6 402 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 KIAA0513O60268 411 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 WNT11O96014 354 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 LPLP06858 475 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 S100A10P60903 97 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 SMAD2Q15796 467 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC25A25Q6KCM7 469 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF585AQ6P3V2 769 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 MBOAT2Q6ZWT7 520 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 GCDHQ92947 438 aaPredicted RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 C20orf27Q9GZN8 174 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 OBP2BQ9NPH6 170 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 PFDN2Q9UHV9 154 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 EDARQ9UNE0 448 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 A0A1B0GWA3 101 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 TCRBV3S1A0A5B6 114 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 KDM4EB2RXH2 506 aaPredicted RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 PCDH17O14917 1159 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 RAC2P15153 192 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC2A5P22732 501 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 FXYD6P3P58550 94 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF45Q02386 682 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 CAMK2DQ13557 499 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 LAIR1Q6GTX8 287 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 PGBD2Q6P3X8 592 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF322Q6U7Q0 402 aaPredicted RBP9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 DCDC5Q6ZRR9 648 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 GRINAQ7Z429 371 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF615Q8N8J6 731 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC16A11Q8NCK7 471 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 ABHD11Q8NFV4 315 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 OR5D14Q8NGL3 314 aa9.6□□□□□ -0.87
NIPAL3-201ENST00000003912 OR1N1Q8NGS0 311 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms