RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 METRNLQ641Q3 311 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF836Q6ZNA1 936 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 NUDT18Q6ZVK8 323 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 NAXDQ8IW45 347 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 CMTM4Q8IZR5 234 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 SYS1Q8N2H4 156 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 OR9A2Q8NGT5 310 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 FCAMRQ8WWV6 532 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 GIMAP5Q96F15 307 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 KLHL31Q9H511 634 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 NOX3Q9HBY0 568 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 NRIP3Q9NQ35 241 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 PRKAB1Q9Y478 270 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 PDCD5O14737 125 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 ARPC1BO15143 372 aaKnown RBP13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 RP2O75695 350 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 MAKP20794 623 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 TSFMP43897 325 aaKnown RBP13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 GDI2P50395 445 aaKnown RBP13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF136P52737 540 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 CAP1Q01518 475 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 DUSP8Q13202 625 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 CAMK1Q14012 370 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 CDK5R1Q15078 307 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 OLFML2AQ68BL7 652 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC25A25Q6KCM7 469 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 TMPRSS11FQ6ZWK6 438 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 LRRTM4Q86VH4 590 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 OR2L5Q8NG80 312 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 OR13C5Q8NGS8 318 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 NRTNQ99748 197 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 UTP23Q9BRU9 249 aaKnown RBP13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 MRI1Q9BV20 369 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 CENPFP49454 3210 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 TBC1D3EA0A087X179 549 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 HMSDA8MTL9 139 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 GALR3O60755 368 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 KHDRBS3O75525 346 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC35G4P0C7Q5 338 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 S100A11P31949 105 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 TPMTP51580 245 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 KRT33BQ14525 404 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 AGERQ15109 404 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 C18orf63Q68DL7 685 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 HSD17B13Q7Z5P4 300 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 PELOQ9BRX2 385 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 TTYH1Q9H313 450 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 CLDND1Q9NY35 253 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 ZNF69Q9UC07 566 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC23A2Q9UGH3 650 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 OR2M5A3KFT3 312 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 IFNGP01579 166 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 CXCL10P02778 98 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 DDX6P26196 483 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 MECP2P51608 486 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 EEF1A1P68104 462 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 ARHGAP11BQ3KRB8 267 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 ZNF626Q68DY1 528 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 MTFR2Q6P444 385 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 IZUMO1Q8IYV9 350 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 LINC01555Q8NAE3 123 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 OR52I2Q8NH67 350 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 COX14Q96I36 57 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 ZNF681Q96N22 645 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 MS4A4EQ96PG1 132 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 MRPL15Q9P015 296 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 SIGLEC7Q9Y286 467 aa13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 AK6Q9Y3D8 172 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-220ENST00000635988 C8AP07357 584 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 FGF2P09038 288 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 BCL6P41182 706 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 RAD52P43351 418 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 ILF3Q12906 894 aaKnown RBP eCLIP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 MFSD12Q6NUT3 480 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 RPL22L1Q6P5R6 122 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 APOOLQ6UXV4 268 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 UBE2Q1Q7Z7E8 422 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC43A2Q8N370 569 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 EIF4E3Q8N5X7 224 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 PMEPA1Q969W9 287 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SCLYQ96I15 445 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SEC22CQ9BRL7 303 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SARGQ9BW04 601 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 RNF186Q9NXI6 227 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 MED11Q9P086 117 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 NTMQ9P121 344 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 PCYT1BQ9Y5K3 369 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 A0A1W2PPK0 400 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 ANKRD20A5PA0PJZ0 165 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC22A23A1A5C7 686 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 RGS11O94810 467 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 OR2T7P0C7T2 308 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 IL9P15248 144 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 PPP3CBP16298 524 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 LAG3P18627 525 aa13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SEC61A1P61619 476 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-220ENST00000635988 SIRPAP78324 504 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms