RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 TACR3P29371 465 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 SMIM11AP58511 58 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 B3GALT5-AS1P59052 145 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 CXADRP78310 365 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 PPP2R2BQ00005 443 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 FOXF1Q12946 379 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 ZNF766Q5HY98 468 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 ALG10BQ5I7T1 473 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 FGD3Q5JSP0 725 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 DCST1Q5T197 706 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 PGBD2Q6P3X8 592 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 ULK3Q6PHR2 472 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 ZER1Q7Z7L7 766 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 HIPK1Q86Z02 1210 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 P3H2Q8IVL5 708 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 RBMXL3Q8N7X1 1067 aaKnown RBP12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 OR4K17Q8NGC6 315 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 OR4K5Q8NGD3 323 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 ZNF563Q8TA94 476 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 GIPC3Q8TF64 312 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 DNAJA4Q8WW22 397 aaPredicted RBP12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 ACOT11Q8WXI4 607 aaPredicted RBP12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 UBL7Q96S82 380 aaPredicted RBP12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 OSBPL10Q9BXB5 764 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 ZFP64Q9NPA5 681 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 MEPEQ9NQ76 525 aaPredicted RBP12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 C15orf41Q9Y2V0 281 aa12.88□□□□□ -0.35
PHACTR4-209ENST00000633371 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 KLF4O43474 513 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 MITFO75030 526 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 CCNB2O95067 398 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 NUDT14O95848 222 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 GASTP01350 101 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 RFC3P40938 356 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 OMPP47874 163 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 MEOX1P50221 254 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 COPZ1P61923 177 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 EGR4Q05215 589 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 DAG1Q14118 895 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 GK3PQ14409 553 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 OTUD3Q5T2D3 398 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 SWT1Q5T5J6 900 aaKnown RBP12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 ZBTB49Q6ZSB9 765 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 GALNT4Q8N4A0 578 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 OR10G2Q8NGC3 310 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 OR5M1Q8NGP8 315 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 PFN4Q8NHR9 129 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 ST8SIA1Q92185 356 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 EME1Q96AY2 570 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 ZNF597Q96LX8 424 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 JSRP1Q96MG2 331 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 FEVQ99581 238 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 NIPSNAP1Q9BPW8 284 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 C9orf16Q9BUW7 83 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 C12orf10Q9HB07 376 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 C20orf141Q9NUB4 165 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 USE1Q9NZ43 259 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 RPS6KB2Q9UBS0 482 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 PRDM4Q9UKN5 801 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 VDAC3Q9Y277 283 aa12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 KLF13Q9Y2Y9 288 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-209ENST00000633371 TMED7-TICAM2A0A0A6YYA0 188 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 ZC3H12DA2A288 527 aaKnown RBP12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 TMEM8BA6NDV4 472 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 ARRDC5A6NEK1 342 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 NPIPB7O75200 414 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 CBR3O75828 277 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 WISP2O76076 250 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 TP53P04637 393 aaPredicted RBP12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 ALPLP05186 524 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 CD46P15529 392 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 DPP4P27487 766 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 VHLP40337 213 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 MASP1P48740 699 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 DSCR4P56555 118 aaPredicted RBP12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 LTBQ06643 244 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 MERTKQ12866 999 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 HYAL4Q2M3T9 481 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 C1QL3Q5VWW1 255 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 KDM4DQ6B0I6 523 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 MBOAT2Q6ZWT7 520 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 GRINAQ7Z429 371 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 ZDHHC13Q8IUH4 622 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 NRMQ8IXM6 262 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 ZFP62Q8NB50 900 aaPredicted RBP12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 TMEM239Q8WW34 195 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 ABHD17AQ96GS6 310 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 MPP4Q96JB8 637 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 C5orf34Q96MH7 638 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 TTTY12Q9BZ98 90 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 KLHL4Q9C0H6 718 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 OR2B2Q9GZK3 357 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 PRORYQ9H606 182 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 TMED7Q9Y3B3 224 aa12.86□□□□□ -0.35
PHACTR4-209ENST00000633371 PCDHGB6Q9Y5F9 930 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms