RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SLC35F3Q8IY50 421 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 YIPF7Q8N8F6 280 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 TCEAL3Q969E4 200 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 FKBP10Q96AY3 582 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 FCRL1Q96LA6 429 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 C19orf43Q9BQ61 176 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 EMC6Q9BV81 110 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 APMAPQ9HDC9 416 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 ZSCAN32Q9NX65 697 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 KCNE5Q9UJ90 142 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 ENTPD2Q9Y5L3 495 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 A0A1W2PRQ8 180 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 AGAP5A6NIR3 686 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 RFPL3O75679 317 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 LALBAP00709 142 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 SPARCP09486 303 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 HOXB9P17482 250 aaPredicted RBP6.93□□□□□ -1.3
PKP4-217ENST00000628904 CD40LGP29965 261 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 EMP3P54852 163 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 OR10A3P58181 314 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 TSPAN31Q12999 210 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 TBCEQ15813 527 aaPredicted RBP6.93□□□□□ -1.3
PKP4-217ENST00000628904 HES5Q5TA89 166 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 C1orf94Q6P1W5 598 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 GUSBP11Q6P575 273 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 SIRT6Q8N6T7 355 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 OR6Q1Q8NGQ2 317 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 OPALINQ96PE5 141 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.93□□□□□ -1.3
PKP4-217ENST00000628904 GAREM1Q9H706 876 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 SMURF1Q9HCE7 757 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 MAN2C1Q9NTJ4 1040 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 QPCTLQ9NXS2 382 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 CRNNQ9UBG3 495 aaPredicted RBP6.93□□□□□ -1.3
PKP4-217ENST00000628904 SEC14L4Q9UDX3 406 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 PLCL2Q9UPR0 1127 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 COL4A3Q01955 1670 aa6.93□□□□□ -1.3
PKP4-217ENST00000628904 TRBV2A0A0J9YWF9 115 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 A6NL46 340 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 AKAP8O43823 692 aaKnown RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 RECKO95980 971 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 HMGN1P05114 100 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 OR8G3PP0DMU2 310 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 PTHLHP12272 177 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 HIST1H1CP16403 213 aaKnown RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 CD27P26842 260 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 TACR3P29371 465 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 SLC1A3P43003 542 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 CTBP2P56545 445 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 FOXK2Q01167 660 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 IFITM3Q01628 133 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 DMPKQ09013 629 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 TOMM34Q15785 309 aaPredicted RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 SSX1Q16384 188 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 GLYR1Q49A26 553 aaPredicted RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 ZNF658BQ4V348 819 aaPredicted RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 PHC2Q8IXK0 858 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 ALDH16A1Q8IZ83 802 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 MAFAQ8NHW3 353 aaPredicted RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 TMEM163Q8TC26 289 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 TSEN15Q8WW01 171 aaKnown RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 NEDD4LQ96PU5 975 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 TAPBPLQ9BX59 468 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 AKIRIN1Q9H9L7 192 aaPredicted RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 GPN2Q9H9Y4 310 aaPredicted RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 ZNF304Q9HCX3 659 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 NLKQ9UBE8 527 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 GRHPRQ9UBQ7 328 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 CES1P1Q9UKY3 287 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 C19orf53Q9UNZ5 99 aaPredicted RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 DENND4CQ5VZ89 1909 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 DMDP11532 3685 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 TMEM72A0PK05 275 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 E9PI62 339 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 ATP6V1G1O75348 118 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 NID1P14543 1247 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 MYL9P24844 172 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 BCAP31P51572 246 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 RACK1P63244 317 aaKnown RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 PSG6Q00889 435 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 SLX4IPQ5VYV7 408 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 LRFN4Q6PJG9 635 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 ZNF367Q7RTV3 350 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 NRARPQ7Z6K4 114 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 ZNF676Q8N7Q3 588 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 MOSPD2Q8NHP6 518 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 TRUB1Q8WWH5 349 aaKnown RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 TM9SF4Q92544 642 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 CCDC74AQ96AQ1 378 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 SGTBQ96EQ0 304 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 CRELD1Q96HD1 420 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 CDADC1Q9BWV3 514 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 GABARAPL3Q9BY60 117 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 SYT4Q9H2B2 425 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 ASB6Q9NWX5 421 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 TXNL4BQ9NX01 149 aaKnown RBP6.92□□□□□ -1.3
PKP4-217ENST00000628904 REV1Q9UBZ9 1251 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 PCDHGB6Q9Y5F9 930 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 PEX16Q9Y5Y5 336 aa6.92□□□□□ -1.3
PKP4-217ENST00000628904 PRAMEF2O60811 474 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms