RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 KCTD7Q96MP8 289 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 TM9SF2Q99805 663 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 NDC1Q9BTX1 674 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 MED18Q9BUE0 208 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 MKKSQ9NPJ1 570 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ABCB10Q9NRK6 738 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 UBQLN4Q9NRR5 601 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 TOR4AQ9NXH8 423 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ICAM5Q9UMF0 924 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 CAB39Q9Y376 341 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ZC3H12DA2A288 527 aaKnown RBP18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 PPP1R3DO95685 299 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 IL33O95760 270 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 IGKV3-11P04433 115 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 RORAP35398 523 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 COPZ1P61923 177 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 FNDC7Q5VTL7 733 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 WDR74Q6RFH5 385 aaPredicted RBP18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 KMT5CQ86Y97 462 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 SLITRK4Q8IW52 837 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 ZFP41Q8N8Y5 198 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF527Q8NB42 609 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 CLIP3Q96DZ5 547 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 CLCA3PQ9Y6N3 262 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 ASXL3Q9C0F0 2248 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 HEATR5AQ86XA9 2040 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 CCDC182A6NF36 153 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 A8MUA0 341 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 LRRTM2O43300 516 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 TBX1O43435 398 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 PRKNO60260 465 aaPredicted RBP18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 MYF5P13349 255 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF3P17036 446 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 HK1P19367 917 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 FABP5Q01469 135 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 KLHL12Q53G59 568 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 C7orf57Q8NEG2 295 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC2A12Q8TD20 617 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 SGTBQ96EQ0 304 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 TEAD3Q99594 435 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 OR8D2Q9GZM6 311 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 NXF5Q9H1B4 397 aaKnown RBP18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF304Q9HCX3 659 aa18.1■□□□□ 0.49
PCDHB11-202ENST00000624887 UNC13CQ8NB66 2214 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 NUP210LQ5VU65 1888 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 IQCMA0A1B0GVH7 501 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 TRDV1A0A1B0GX56 115 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 FRG2CA6NGY1 282 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 C12orf71A8MTZ7 269 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 A8MU76 341 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 DDAH2O95865 285 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 BDH1Q02338 343 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 RUNX1T1Q06455 604 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 CRMP1Q14194 572 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 SHBQ15464 509 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 ELAVL1Q15717 326 aaKnown RBP18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 ARHGAP11AQ6P4F7 1023 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 TMPRSS11AQ6ZMR5 421 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 MAMSTRQ6ZN01 415 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF721Q8TF20 911 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 C3orf49Q96BT1 292 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 CEP19Q96LK0 163 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 ELF4Q99607 663 aaPredicted RBP18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 COQ7Q99807 217 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC30A2Q9BRI3 323 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 TPK1Q9H3S4 243 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 RERGLQ9H628 205 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 SERTAD3Q9UJW9 196 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 GSTK1Q9Y2Q3 226 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 PCDHGB6Q9Y5F9 930 aa18.09■□□□□ 0.49
PCDHB11-202ENST00000624887 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 TCRBV16S1A1N1A0A5B0 115 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 LOC110117498-PIK3R3F6TDL0 507 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 GNB5O14775 395 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 PPM1BO75688 479 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 SNX4O95219 450 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 FBLP22087 321 aaKnown RBP18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC2A5P22732 501 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 NOS3P29474 1203 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 TNFSF8P32971 234 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 ZXDAP98168 799 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 MXD1Q05195 221 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 DNASE1L3Q13609 305 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 STEAP3Q658P3 488 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 FCRLBQ6BAA4 426 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 NCCRP1Q6ZVX7 275 aaPredicted RBP18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC22A16Q86VW1 577 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 LCORQ96JN0 433 aaPredicted RBP18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 CCNL2Q96S94 520 aaPredicted RBP18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 TIMP4Q99727 224 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 OR51V1Q9H2C8 321 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 INPP5EQ9NRR6 644 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 SEC16AO15027 2179 aa18.08■□□□□ 0.49
PCDHB11-202ENST00000624887 SDK1Q7Z5N4 2213 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 NDUFB2O95178 105 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 IFNGP01579 166 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 HPGDP15428 266 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 CELP19835 753 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 SDC2P34741 201 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 SLC9A3P48764 834 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms