RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 GTPBP1O00178 669 aaKnown RBP12.1□□□□□ -0.47
C3orf56-201ENST00000624688 CCRL2O00421 344 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 UGT2B10P36537 528 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 SOX3P41225 446 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 CLK1P49759 484 aaKnown RBP12.1□□□□□ -0.47
C3orf56-201ENST00000624688 PNLIPRP2P54317 469 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 ZNF117Q03924 483 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 MOGQ16653 247 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 SOWAHCQ53LP3 525 aaPredicted RBP12.1□□□□□ -0.47
C3orf56-201ENST00000624688 PLBD1Q6P4A8 553 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 MARCH3Q86UD3 253 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 LRRC17Q8N6Y2 441 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 RFKQ969G6 155 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 SGTBQ96EQ0 304 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 SPSB2Q99619 263 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 WDR77Q9BQA1 342 aaPredicted RBP12.1□□□□□ -0.47
C3orf56-201ENST00000624688 HCAR1Q9BXC0 346 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 RNF167Q9H6Y7 350 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 MED20Q9H944 212 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 AKIRIN1Q9H9L7 192 aaPredicted RBP12.1□□□□□ -0.47
C3orf56-201ENST00000624688 ZBTB20Q9HC78 741 aaPredicted RBP12.1□□□□□ -0.47
C3orf56-201ENST00000624688 CMC2Q9NRP2 79 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 OSGIN1Q9UJX0 560 aa12.1□□□□□ -0.47
C3orf56-201ENST00000624688 COL27A1Q8IZC6 1860 aaPredicted RBP12.09□□□□□ -0.47
C3orf56-201ENST00000624688 ALG1L2C9J202 215 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 LRRN3E7EW58 273 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 PPP1R3DO95685 299 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 ZNF28P17035 718 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 MPLP40238 635 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 CCR4P51679 360 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 EMP2P54851 167 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 DCTN2Q13561 401 aaKnown RBP12.09□□□□□ -0.47
C3orf56-201ENST00000624688 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
C3orf56-201ENST00000624688 IL11RAQ14626 422 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 NIPAL3Q6P499 406 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 DBX2Q6ZNG2 339 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 RTL4Q6ZR62 310 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 BPHLQ86WA6 291 aaPredicted RBP12.09□□□□□ -0.47
C3orf56-201ENST00000624688 TMCO5AQ8N6Q1 288 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 OR4F15Q8NGB8 312 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 PTP4A1Q93096 173 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 TP53INP1Q96A56 240 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 CCNL2Q96S94 520 aaPredicted RBP12.09□□□□□ -0.47
C3orf56-201ENST00000624688 ZNF649Q9BS31 505 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 RACGAP1Q9H0H5 632 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 SLC26A1Q9H2B4 701 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 ARRDC1-AS1Q9H2J1 176 aa12.09□□□□□ -0.47
C3orf56-201ENST00000624688 MEN1O00255 615 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 ADAM10O14672 748 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 MYL12BO14950 172 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 FADS1O60427 444 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 ZNF354AO60765 605 aaPredicted RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 OR7A10O76100 309 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 NADKO95544 446 aaPredicted RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 LIMS3P0CW19 117 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 LIMS4P0CW20 117 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 MYL12AP19105 171 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 ENDOUP21128 410 aaKnown RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 SLC6A6P31641 620 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 CD79BP40259 229 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 BMXP51813 675 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 DBPQ10586 325 aaPredicted RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 MLLT11Q13015 90 aaPredicted RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 DGUOKQ16854 277 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 OR2G6Q5TZ20 316 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 FCRLBQ6BAA4 426 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 MRPL14Q6P1L8 145 aaKnown RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 C16orf47Q6ZP98 133 aaPredicted RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 SLC43A2Q8N370 569 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 ZNF485Q8NCK3 441 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 KISS1RQ969F8 398 aaPredicted RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 ZHX1-C8orf76Q96EF9 292 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 SH3YL1Q96HL8 342 aaPredicted RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 CHCHD6Q9BRQ6 235 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 SLC19A3Q9BZV2 496 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 ADAM19Q9H013 955 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 DCSTAMPQ9H295 470 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 BAIAP2Q9UQB8 552 aa12.08□□□□□ -0.47
C3orf56-201ENST00000624688 EXOSC1Q9Y3B2 195 aaKnown RBP12.08□□□□□ -0.47
C3orf56-201ENST00000624688 LOC100506127A0A0U1RQW1 187 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 TMEM129A0AVI4 362 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 ZC3H12DA2A288 527 aaKnown RBP12.08□□□□□ -0.48
C3orf56-201ENST00000624688 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 CCDC182A6NF36 153 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 TMEM200CA6NKL6 621 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 ELOA3DA6NLF2 546 aaPredicted RBP12.08□□□□□ -0.48
C3orf56-201ENST00000624688 J3QRE1 110 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 CPNE3O75131 537 aaKnown RBP12.08□□□□□ -0.48
C3orf56-201ENST00000624688 PPM1BO75688 479 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 GPX5O75715 221 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 IGHA1P01876 353 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 PNMTP11086 282 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 CCL4P13236 92 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 SLC9A3P48764 834 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 WNT4P56705 351 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 EGR4Q05215 589 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 ITGADQ13349 1161 aa12.08□□□□□ -0.48
C3orf56-201ENST00000624688 ANGPT1Q15389 498 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms