RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MEDAGQ5VYS4 303 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 GTF2IRD2BQ6EKJ0 949 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 BCDIN3DQ7Z5W3 292 aaKnown RBP19.6■□□□□ 0.73
SPAST-204ENST00000621856 ATG4DQ86TL0 474 aaPredicted RBP19.6■□□□□ 0.73
SPAST-204ENST00000621856 OAFQ86UD1 273 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 GTF2IRD2Q86UP8 949 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 PRSS33Q8NF86 280 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 CT55Q8WUE5 264 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 LRR1Q96L50 414 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 SIGLEC11Q96RL6 698 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 TRAV27A0A087WT01 109 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 C17orf51A8MQB3 221 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 C9orf172C9J069 976 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 INMTO95050 263 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 PGCP20142 388 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 TMED10P49755 219 aaKnown RBP19.59■□□□□ 0.73
SPAST-204ENST00000621856 SYT14P1Q58G82 188 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 C3orf38Q5JPI3 329 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 SMARCD3Q6STE5 483 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 NUP54Q7Z3B4 507 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 TIPARPQ7Z3E1 657 aaKnown RBP19.59■□□□□ 0.73
SPAST-204ENST00000621856 MISPQ8IVT2 679 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 OR51A7Q8NH64 312 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 OR5W2Q8NH69 310 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 ELP5Q8TE02 316 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 HGDQ93099 445 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 KLHDC3Q9BQ90 382 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 UBQLN3Q9H347 655 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 CXorf56Q9H5V9 222 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 HHATLQ9HCP6 504 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 ACOT13Q9NPJ3 140 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 SIGLEC7Q9Y286 467 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 GPR52Q9Y2T5 361 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 RPL36Q9Y3U8 105 aaKnown RBP19.59■□□□□ 0.73
SPAST-204ENST00000621856 SURF4O15260 269 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 MAN1A2O60476 641 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 OR2J2O76002 312 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 C21orf33P30042 268 aaPredicted RBP19.59■□□□□ 0.73
SPAST-204ENST00000621856 SLC1A3P43003 542 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 FXYD6P3P58550 94 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 EFNB1P98172 346 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 CBFBQ13951 182 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 SLC25A30Q5SVS4 291 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 PIP4P1Q86T03 277 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 IMMP1LQ96LU5 166 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 ZNF582Q96NG8 517 aaPredicted RBP19.59■□□□□ 0.73
SPAST-204ENST00000621856 SLC19A3Q9BZV2 496 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 WARS2Q9UGM6 360 aaKnown RBP19.59■□□□□ 0.73
SPAST-204ENST00000621856 PCDHGA3Q9Y5H0 932 aa19.59■□□□□ 0.73
SPAST-204ENST00000621856 A0A1W2PNU3 283 aaPredicted RBP19.58■□□□□ 0.72
SPAST-204ENST00000621856 NOL3O60936 208 aaKnown RBP19.58■□□□□ 0.72
SPAST-204ENST00000621856 DBTP11182 482 aaKnown RBP19.58■□□□□ 0.72
SPAST-204ENST00000621856 PIPP12273 146 aaPredicted RBP19.58■□□□□ 0.72
SPAST-204ENST00000621856 GP1BBP13224 206 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 MST1P26927 711 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 GRK5P34947 590 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 P2RX1P51575 399 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 GP2P55259 537 aaKnown RBP19.58■□□□□ 0.72
SPAST-204ENST00000621856 RPS18P62269 152 aaKnown RBP19.58■□□□□ 0.72
SPAST-204ENST00000621856 ZNF91Q05481 1191 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 B4GALNT2Q8NHY0 566 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 DUSP19Q8WTR2 217 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 IFT27Q9BW83 186 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 MED17Q9NVC6 651 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 FAM86C1Q9NVL1 165 aa19.58■□□□□ 0.72
SPAST-204ENST00000621856 NSG1A0A0A6YYJ2 146 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 CELA2AP08217 269 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 RAB40ALP0C0E4 278 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 PSMB9P28065 219 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 TACR3P29371 465 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 OTX2P32243 289 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 SLC15A1P46059 708 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 STPG1Q5TH74 334 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 PLAG1Q6DJT9 500 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 OR11G2Q8NGC1 345 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 M1APQ8TC57 530 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 TTC9Q92623 222 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 ISOC1Q96CN7 298 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 TNFRSF13CQ96RJ3 184 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 TMEM43Q9BTV4 400 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 ENKD1Q9H0I2 346 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 FOXJ2Q9P0K8 574 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 TCFL5Q9UL49 500 aa19.57■□□□□ 0.72
SPAST-204ENST00000621856 IGKV1D-42A0A075B6H8 117 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 SNTNA6NMZ2 147 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 SOCS6O14544 535 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 PTP4A3O75365 173 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 GSTT1P30711 240 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 THSD4Q6ZMP0 1018 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 NDUFAF7Q7L592 441 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 DEFB124Q8NES8 71 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 FCGR1BQ92637 280 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 FGF11Q92914 225 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 ZNF524Q96C55 264 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 TSC22D3Q99576 134 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 C12orf10Q9HB07 376 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 ZNF160Q9HCG1 818 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 MMP25Q9NPA2 562 aa19.56■□□□□ 0.72
SPAST-204ENST00000621856 FARSAQ9Y285 508 aaKnown RBP19.56■□□□□ 0.72
SPAST-204ENST00000621856 BHLHE40O14503 412 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms