RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 KRT34O76011 436 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 UBTFL6P0CB48 400 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 PGM1P36871 562 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 ANXA11P50995 505 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 CTBP2P56545 445 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 CHRNEQ04844 493 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 ZNF239Q16600 458 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 EXOC3L2Q2M3D2 409 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 C22orf34Q6ZV56 151 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 EIF3MQ7L2H7 374 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 ZNF619Q8N2I2 560 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 RP9Q8TA86 221 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 QRSL1Q9H0R6 528 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 COQ10BQ9H8M1 238 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 POLE3Q9NRF9 147 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 GLRX2Q9NS18 164 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 SLC6A13Q9NSD5 602 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 GID8Q9NWU2 228 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 GJE1A6NN92 205 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 C16orf97H3BN30 126 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 SIAH2O43255 324 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 GOSR1O95249 250 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 H6PDO95479 791 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 MNAT1P51948 309 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 SESN3P58005 492 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 SELENBP1Q13228 472 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 SYPL1Q16563 259 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 GPAT3Q53EU6 434 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 COX20Q5RI15 118 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 SNX32Q86XE0 403 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 ANKFN1Q8N957 763 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 FAM71CQ8NEG0 241 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 ZFP90Q8TF47 636 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 ABHD3Q8WU67 409 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 TIGARQ9NQ88 270 aa16.03■□□□□ 0.16
SCAMP4-213ENST00000621748 A0A1W2PNR3 127 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 CLDN24A6NM45 220 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 KRT75O95678 551 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 CD1EP15812 388 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 DNASE1P24855 282 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 PRDX6P30041 224 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 AGTR1P30556 359 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 MXRA7P84157 204 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 PLAURQ03405 335 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 NFYCQ13952 458 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 ANKRD34AQ69YU3 496 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 GTF2IRD2BQ6EKJ0 949 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 SLC2A7Q6PXP3 512 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 ZNF550Q7Z398 422 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 GTF2IRD2Q86UP8 949 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 FUNDC1Q8IVP5 155 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 PNPT1Q8TCS8 783 aaKnown RBP16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 RNF128Q8TEB7 428 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 OIT3Q8WWZ8 545 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 ST8SIA1Q92185 356 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 CPNE4Q96A23 557 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 TRNT1Q96Q11 434 aaKnown RBP16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 FOXC2Q99958 501 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 MED18Q9BUE0 208 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 CCDC106Q9BWC9 280 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 KLHL4Q9C0H6 718 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 SLC38A1Q9H2H9 487 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 RAD21L1Q9H4I0 556 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 EFCAB1Q9HAE3 211 aa16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 C6orf203Q9P0P8 240 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-213ENST00000621748 VPS13CQ709C8 3753 aa16.02■□□□□ 0.15
SCAMP4-213ENST00000621748 DEFB108AA8MXU0 73 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 EVPLLA8MZ36 301 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 CHRM4P08173 479 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 COX4I1P13073 169 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 PGCP20142 388 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 ENPP1P22413 925 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 PPIBP23284 216 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 KCNJ10P78508 379 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 PAMR1Q6UXH9 720 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 DNAJC14Q6Y2X3 702 aaPredicted RBP16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 PLEKHM3Q6ZWE6 761 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 REXO5Q96IC2 774 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 CXXC4Q9H2H0 198 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 C12orf49Q9H741 205 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 ACER3Q9NUN7 267 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 LIPT1Q9Y234 373 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 SLC35A3Q9Y2D2 325 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 ROS1P08922 2347 aa16.01■□□□□ 0.15
SCAMP4-213ENST00000621748 A0A096LPI6 279 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 IGHV3-15A0A0B4J1V0 119 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 MRASO14807 208 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 ADAM11O75078 769 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 NPPAP01160 153 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 PABPC4LP0CB38 370 aaKnown RBP16■□□□□ 0.15
SCAMP4-213ENST00000621748 CRYGSP22914 178 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 SLC7A1P30825 629 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 RYKP34925 604 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 MVDP53602 400 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 RAC3P60763 192 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 HPCAP84074 193 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 MERTKQ12866 999 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 RNPS1Q15287 305 aaKnown RBP16■□□□□ 0.15
SCAMP4-213ENST00000621748 COQ5Q5HYK3 327 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms