RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ARTNQ5T4W7 220 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 FAM69AQ5T7M9 428 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 GLDNQ6ZMI3 551 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 DPPA4Q7L190 304 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 COMTD1Q86VU5 262 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 VRK2Q86Y07 508 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 GTPBP8Q8N3Z3 284 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 SYNPRQ8TBG9 265 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 BRIX1Q8TDN6 353 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 AUTS2Q8WXX7 1259 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ZG16BQ96DA0 208 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 MCHR1Q99705 422 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 GPR174Q9BXC1 333 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ACSS1Q9NUB1 689 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 COA4Q9NYJ1 87 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 AHSPQ9NZD4 102 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ASH2LQ9UBL3 628 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 LHX3Q9UBR4 397 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 KCND3Q9UK17 655 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 NOP16Q9Y3C1 178 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 A0A1B0GUH1 482 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 PRKRAO75569 313 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ARL6IP5O75915 188 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ACAA1P09110 424 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 PRPH2P23942 346 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 HTR2AP28223 471 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 NCBP2P52298 156 aaKnown RBP eCLIP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 H2BFSP57053 126 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 OR7A5Q15622 319 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 PGGHGQ32M88 737 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 FRRS1Q6ZNA5 592 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ARL14Q8N4G2 192 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 OR52N1Q8NH53 320 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 SMIM4Q8WVI0 70 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 MS4A4EQ96PG1 132 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 RSRP1Q9BUV0 290 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 HRH4Q9H3N8 390 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 FARSAQ9Y285 508 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 PLEKHM1Q9Y4G2 1056 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 LAMA3Q16787 3333 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 A0A1W2PRQ8 180 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 FAM86C2PA6NEL3 165 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 HMGN4O00479 90 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 POP7O75817 140 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 RBBP9O75884 186 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 FBXO45P0C2W1 286 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 NDUFV2P19404 249 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 CNR1P21554 472 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 OMPP47874 163 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 PGDP52209 483 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 AP1S1P61966 158 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 EEF1A2Q05639 463 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ST3GAL3Q11203 375 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 KLF9Q13886 244 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 SMAD2Q15796 467 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 GLT8D1Q68CQ7 371 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 OR7E24Q6IFN5 339 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 C5orf46Q6UWT4 87 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.08□□□□□ -0.963e-7■■■■□ 25.7
TNFAIP3-210ENST00000620204 MCATQ8IVS2 390 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 CCDC116Q8IYX3 515 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 PHOSPHO1Q8TCT1 267 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 CASTOR1Q8WTX7 329 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 MYLIPQ8WY64 445 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 WBP2Q969T9 261 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 ZMYND19Q96E35 227 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 TMEM106CQ9BVX2 250 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 CHRDQ9H2X0 955 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 CHMP1AQ9HD42 196 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 OPN4Q9UHM6 478 aa9.08□□□□□ -0.96
TNFAIP3-210ENST00000620204 LRRC37A2A6NM11 1700 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 ARRDC5A6NEK1 342 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 H0YIV9 168 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 ABCD4O14678 606 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 SELENOFO60613 162 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 OAZ2O95190 189 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 EPXP11678 715 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 PSMD4P55036 377 aaKnown RBP9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 CLDN2P57739 230 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 SLC9A5Q14940 896 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 PEA15Q15121 130 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 TMEM220Q6QAJ8 160 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 CPXM2Q8N436 756 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 TBC1D19Q8N5T2 526 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 KCT2Q8NC54 265 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 CHST14Q8NCH0 376 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 TMIEQ8NEW7 156 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 OR6K6Q8NGW6 343 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 OR6S1Q8NH40 331 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 AHCYL2Q96HN2 611 aaKnown RBP9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 NKX3-1Q99801 234 aaPredicted RBP9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 MACROD1Q9BQ69 325 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 SLITRK2Q9H156 845 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 TRPV4Q9HBA0 871 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 FBXL4Q9UKA2 621 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 SH2B3Q9UQQ2 575 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 C13orf42A0A1B0GVH6 325 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 FEZF1A0PJY2 475 aa9.07□□□□□ -0.96
TNFAIP3-210ENST00000620204 PTAFRP25105 342 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms