RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 GAB1Q13480 694 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SPRED3Q2MJR0 410 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 PAGE3Q5JUK9 113 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 PDZD3Q86UT5 571 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SLC2A13Q96QE2 648 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 KIF1AQ12756 1690 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 CNMDO75829 334 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 C1GALT1C1LP0DN25 315 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 CORO1AP31146 461 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 OR5P2Q8WZ92 322 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TFGQ92734 400 aaPredicted RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TSGA13Q96PP4 275 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TMEM175Q9BSA9 504 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 NAA50Q9GZZ1 169 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 IL20RAQ9UHF4 553 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 LILRB3O75022 631 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 POU3F4P49335 361 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TMEM97Q5BJF2 176 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 INTS12Q96CB8 462 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF599Q96NL3 588 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SPATC1LQ9H0A9 340 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 HSD3B7Q9H2F3 369 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TTC24A2A3L6 582 aaPredicted RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SCG5P05408 212 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 AADACP22760 399 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 KIAA1324Q6UXG2 1013 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SLC35D2Q76EJ3 337 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SIAH3Q8IW03 269 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 ZFPM2Q8WW38 1151 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 USB1Q9BQ65 265 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 UCK1Q9HA47 277 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SLC2A6Q9UGQ3 507 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TBX19O60806 448 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 GPLD1P80108 840 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 FUT10Q6P4F1 479 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 L3MBTL4Q8NA19 623 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 OR2G3Q8NGZ4 309 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 ASB13Q8WXK3 278 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TPPP3Q9BW30 176 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 DCAF13Q9NV06 445 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 M0R2Z0 102 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 RNH1P13489 461 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 PMS2P11Q13670 270 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 RPUSD3Q6P087 351 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF547Q8IVP9 402 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 DTD1Q8TEA8 209 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 NANOS1Q8WY41 292 aaKnown RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 CDH20Q9HBT6 801 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 RHBDD3Q9Y3P4 386 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TRIP12Q14669 1992 aaPredicted RBP14.15□□□□□ -0.14
COL5A1-208ENST00000618395 HEATR5BQ9P2D3 2071 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 TCRBV3S1A0A5B6 114 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 TCF21O43680 179 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 IL33O95760 270 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 TTRP02766 147 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 ADORA3P0DMS8 318 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 F2RL1P55085 397 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 LRRC32Q14392 662 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 SHEQ5VZ18 495 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 CARD17Q5XLA6 110 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 TVP23CQ96ET8 276 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 IL20Q9NYY1 176 aa14.15□□□□□ -0.15
COL5A1-208ENST00000618395 NME2P1O60361 137 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 HLA-DQB2P05538 268 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ARL16Q0P5N6 197 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ASAH1Q13510 395 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ACOT6Q3I5F7 207 aaPredicted RBP14.14□□□□□ -0.15
COL5A1-208ENST00000618395 SLC22A6Q4U2R8 563 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 Q6ZN92 141 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 MDGA2Q7Z553 956 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 OR4F15Q8NGB8 312 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 HCAR1Q9BXC0 346 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ENPP4Q9Y6X5 453 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 TCRBV5S4A2TA0A5A2 114 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 SLC22A20A6NK97 555 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 LGALS8O00214 317 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 NCR1O76036 304 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ALDOAP04075 364 aaKnown RBP14.14□□□□□ -0.15
COL5A1-208ENST00000618395 MGMTP16455 207 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 LEG1Q6P5S2 330 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 IL34Q6ZMJ4 242 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 NDRG1Q92597 394 aaKnown RBP14.14□□□□□ -0.15
COL5A1-208ENST00000618395 PRRC1Q96M27 445 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 CTDSP1Q9GZU7 261 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 IL20RBQ6UXL0 311 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 FCRLAQ7L513 359 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 FBXO27Q8NI29 283 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ACER1Q8TDN7 264 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ARNTL2Q8WYA1 636 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 GPR173Q9NS66 373 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 STC2O76061 302 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 NADSYN1Q6IA69 706 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 CCNL2Q96S94 520 aaPredicted RBP14.14□□□□□ -0.15
COL5A1-208ENST00000618395 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
COL5A1-208ENST00000618395 PRNPP04156 253 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 BAXQ07812 192 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 SLC16A10Q8TF71 515 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 A3GALT2U3KPV4 340 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 LOC102723971A0A1B0GUV8 181 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 AGTR2P50052 363 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms