RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CEP76Q8TAP6 659 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 HCAR1Q9BXC0 346 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 CHCHD3Q9NX63 227 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZC3H12DA2A288 527 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF264O43296 627 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 HEXBP07686 556 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 HOXD12P35452 270 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF829Q3KNS6 432 aaPredicted RBP15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 TBC1D25Q3MII6 688 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 ANKDD1AQ495B1 522 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 USP43Q70EL4 1123 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 LRRC17Q8N6Y2 441 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 DTWD2Q8NBA8 298 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF524Q96C55 264 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 OMA1Q96E52 524 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 SGTBQ96EQ0 304 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 SH3YL1Q96HL8 342 aaPredicted RBP15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 GFM1Q96RP9 751 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 RACGAP1Q9H0H5 632 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 CMC2Q9NRP2 79 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 FAM86C2PA6NEL3 165 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 C17orf51A8MQB3 221 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 J3QRK9 145 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 GMFGO60234 142 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 GDF9O60383 454 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 TSPAN2O60636 221 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 GPX5O75715 221 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 LIMS3P0CW19 117 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 LIMS4P0CW20 117 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 CD79BP40259 229 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 SERPINB10P48595 397 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 DCDP81605 110 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 MLLT11Q13015 90 aaPredicted RBP15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 LIPKQ5VXJ0 399 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 WBP2NLQ6ICG8 309 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 NIPAL3Q6P499 406 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 ANKRD37Q7Z713 158 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 LHFPL3Q86UP9 236 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF441Q8N8Z8 693 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 OIT3Q8WWZ8 545 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 CTRCQ99895 268 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 FN3KQ9H479 309 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 ICAM5Q9UMF0 924 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 EXOSC1Q9Y3B2 195 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 CORINQ9Y5Q5 1042 aa15.88■□□□□ 0.13
PCDHGC3-205ENST00000617641 TO15178 435 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 ABCD3P28288 659 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 SLC9A3P48764 834 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 WNT4P56705 351 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 TUBA1BP68363 451 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 TIMM50Q3ZCQ8 353 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 SLC23A3Q6PIS1 610 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 TUBA1AQ71U36 451 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 PPP1R3BQ86XI6 285 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 DRAXINQ8NBI3 349 aaPredicted RBP15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 KBTBD8Q8NFY9 601 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 BORCS5Q969J3 196 aa15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 EXOSC3Q9NQT5 275 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-205ENST00000617641 IGKV1D-42A0A075B6H8 117 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 TMEM129A0AVI4 362 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 TMEM221A6NGB7 291 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ELOA3DA6NLF2 546 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR6C76A6NM76 312 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 M0R296 226 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 MST1P26927 711 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ELOA3BQ3SY89 546 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF362Q5T0B9 420 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF385CQ66K41 422 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 LCN10Q6JVE6 187 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 RTL4Q6ZR62 310 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 MARCH3Q86UD3 253 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 IGFN1Q86VF2 1251 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 GID4Q8IVV7 300 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ELOA3Q8NG57 546 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 GATAD2BQ8WXI9 593 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 VMP1Q96GC9 406 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 FBXO4Q9UKT5 387 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 EXOGQ9Y2C4 368 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ENDOUP21128 410 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 SLC6A6P31641 620 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ATP6V1E1P36543 226 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 SLC1A3P43003 542 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF117Q03924 483 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 GXYLT1Q4G148 440 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 C16orf47Q6ZP98 133 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 ATG4DQ86TL0 474 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 PHC2Q8IXK0 858 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 SIRT6Q8N6T7 355 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 TM9SF4Q92544 642 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 PTP4A1Q93096 173 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 EXOSC4Q9NPD3 245 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 NDUFB11Q9NX14 153 aa15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 SPIN1Q9Y657 262 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-205ENST00000617641 PNMA8CA0A1B0GUJ8 204 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 RIIAD1A6NNX1 92 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 D6RAR5 112 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 PRR23D1E9PI22 279 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 ALOX12BO75342 701 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 PRR23D2P0DMB1 279 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 NOS3P29474 1203 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms