RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LANCL1O43813 399 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 ZIC2O95409 532 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 CFDP00746 253 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 CENPAP49450 140 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 OTPQ5XKR4 325 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 MARCH9Q86YJ5 346 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 LIX1LQ8IVB5 337 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 AP3S1Q92572 193 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 MSLNLQ96KJ4 702 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 SAMD8Q96LT4 415 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 GABRG3Q99928 467 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 CHIAQ9BZP6 476 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 SAP130Q9H0E3 1048 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 DAPP1Q9UN19 280 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 CUL9Q8IWT3 2517 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 A0A1W2PPK0 400 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 MAGEB4O15481 346 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 CHP2O43745 196 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 REM1O75628 298 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 NOS3P29474 1203 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 FABP5Q01469 135 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 TTLL10Q6ZVT0 673 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 SLC30A8Q8IWU4 369 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 SMRP1Q8NCR6 262 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 EXTL2Q9UBQ6 330 aa13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 ELF5Q9UKW6 265 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 MRPS7Q9Y2R9 242 aaKnown RBP13.41□□□□□ -0.26
SHROOM1-208ENST00000617339 HCN1O60741 890 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 MAOAP21397 527 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 RPS15AP62244 130 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 PCDH1Q08174 1060 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 GPR176Q14439 515 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 ANGPT1Q15389 498 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 PUS10Q3MIT2 529 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 IDNKQ5T6J7 187 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 CAMKVQ8NCB2 501 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 OR11H7Q8NGC8 314 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 OR56A1Q8NGH5 318 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 ABCG5Q9H222 651 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 H2AFY2Q9P0M6 372 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 RPL36Q9Y3U8 105 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 LINC00862A6NCI5 91 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 E9PQ18 207 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 PRICKLE3O43900 615 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 SLC43A1O75387 559 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 OR1D4P47884 311 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 GFERP55789 205 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 ZNF628Q5EBL2 1059 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 ZNF425Q6IV72 752 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 GDPGP1Q6ZNW5 385 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 OR51G2Q8NGK0 314 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 TMEM43Q9BTV4 400 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 SPATA5L1Q9BVQ7 753 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 ACTRT3Q9BYD9 372 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 GSTK1Q9Y2Q3 226 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 TRAV27A0A087WT01 109 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 C2orf74A8MZ97 194 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 EEF1E1O43324 174 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 CD38P28907 300 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 RABIFP47224 123 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 PPP3R1P63098 170 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 TEKQ02763 1124 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 MLLT11Q13015 90 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 HLA-DQA1Q5Y7H0 255 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 TMEM81Q6P7N7 255 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 PRR22Q8IZ63 422 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 PFN4Q8NHR9 129 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 ATOH1Q92858 354 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 SHDQ96IW2 340 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 OR8D2Q9GZM6 311 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 ENKD1Q9H0I2 346 aa13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 WSB2Q9NYS7 404 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-208ENST00000617339 FAAHO00519 579 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 DVL2O14641 736 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 MPZL2O60487 215 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 ITPKBP27987 946 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 COX10Q12887 443 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 ENPP2Q13822 863 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 RNF44Q7L0R7 432 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 PRSS42Q7Z5A4 293 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 CLDN22Q8N7P3 220 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 MARVELD1Q9BSK0 173 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 REV1Q9UBZ9 1251 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 MGAT4BQ9UQ53 548 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 NBASA2RRP1 2371 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 HRO43593 1189 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 LGI1O95970 557 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 STOMP27105 288 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 KANSL1Q7Z3B3 1105 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 FAM181AQ8N9Y4 354 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 OR8D4Q8NGM9 314 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 GAL3ST3Q96A11 431 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 FSCN3Q9NQT6 498 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 CES1P1Q9UKY3 287 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 ZNF106Q9H2Y7 1883 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 A0A1B0GVT2 93 aa13.39□□□□□ -0.27
SHROOM1-208ENST00000617339 FAM171A2A8MVW0 826 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms