RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 NIPAL2Q9H841 368 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.64□□□□□ -1.51
RFX3-212ENST00000617270 SPHK2Q9NRA0 654 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SLC39A9Q9NUM3 307 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ZNF816-ZNF321PA0A0X1KG74 233 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 KRBOX1C9JBD0 128 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 DPM1O60762 260 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 OR7C1O76099 320 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 NSA2O95478 260 aaKnown RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 IMPA1P29218 277 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 HBG1P69891 147 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 HBG2P69892 147 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 TLE4Q04727 773 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GPR17Q13304 367 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 C4orf17Q53FE4 359 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 UBE2NLQ5JXB2 153 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ZNF852Q6ZMS4 543 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 TIFABQ6ZNK6 161 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 TSPYL5Q86VY4 417 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 C12orf76Q8N812 135 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 ZNF321PQ8N8H1 164 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 CLEC1AQ8NC01 280 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ZFP90Q8TF47 636 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SLC2A13Q96QE2 648 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 HHIPQ96QV1 700 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 NKX3-1Q99801 234 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 CMSS1Q9BQ75 279 aaKnown RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 INPP5KQ9BT40 448 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SGPP1Q9BX95 441 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 V9GYS6 101 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 A0A1W2PQ09 198 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SLC16A7O60669 478 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 PNPP00491 289 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GSTP1P09211 210 aaKnown RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 SLC35E2BP0CK96 405 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 RPS5P46782 204 aaKnown RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 LTBQ06643 244 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 MFGE8Q08431 387 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 RGNQ15493 299 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 OR4D1Q15615 310 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ACSM3Q53FZ2 586 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 FIGLAQ6QHK4 219 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 MFSD6LQ8IWD5 586 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 FAM109AQ8N4B1 249 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 RNF175Q8N4F7 328 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ASB11Q8WXH4 323 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SORCS2Q96PQ0 1159 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 C20orf24Q9BUV8 137 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 CPEB1Q9BZB8 566 aaKnown RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 ANKMY1Q9P2S6 941 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 IQGAP3Q86VI3 1631 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SLC22A23A1A5C7 686 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 P2RX6O15547 441 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GJB5O95377 273 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 THBS1P07996 1170 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GM2AP17900 193 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 CPOXP36551 454 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 HSD17B7P56937 341 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 MLF1P58340 268 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GPR19Q15760 415 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 DNAJC5GQ8N7S2 189 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 B3GNT7Q8NFL0 401 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 INIPQ9NRY2 104 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 FAM212BQ9NTI7 297 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 FBXL2Q9UKC9 423 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ZFP92A6NM28 416 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 KDM4EB2RXH2 506 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 FAM72CH0Y354 149 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ADAMTS4O75173 837 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 USP2O75604 605 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 SCO1O75880 301 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SLC1A3P43003 542 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ZNF33BQ06732 778 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 DSC1Q08554 894 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GK3PQ14409 553 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 TATDN3Q17R31 274 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 MPEG1Q2M385 716 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 SOHLH1Q5JUK2 328 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 FAM72AQ5TYM5 149 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 FAM72DQ6L9T8 149 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 FAM72BQ86X60 149 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GIMAP1Q8WWP7 306 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 BPIFA2Q96DR5 249 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 MRGPRX2Q96LB1 330 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 NIPSNAP3BQ9BS92 247 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 MKRN2Q9H000 416 aaKnown RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 SEMA6CQ9H3T2 930 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 BARX1Q9HBU1 254 aaPredicted RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 ARNT2Q9HBZ2 717 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 TMEM181Q9P2C4 612 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 CLCF1Q9UBD9 225 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 MEIOCA2RUB1 952 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 CDC14CA4D256 554 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 GPR32O75388 356 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 HBQ1P09105 142 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 HNF1AP20823 631 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 ELAVL3Q14576 367 aaKnown RBP5.64□□□□□ -1.51
RFX3-212ENST00000617270 BPIFB2Q8N4F0 458 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 OR52H1Q8NGJ2 320 aa5.64□□□□□ -1.51
RFX3-212ENST00000617270 OR11L1Q8NGX0 322 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms