RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TMPRSS12Q86WS5 348 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 LSM14AQ8ND56 463 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 OR5AK2Q8NH90 309 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC25A43Q8WUT9 341 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 COX14Q96I36 57 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 QRSL1Q9H0R6 528 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ACOT13Q9NPJ3 140 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 MEGF11A6BM72 1044 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 FAM171A2A8MVW0 826 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 MEN1O00255 615 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 GPR171O14626 319 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 SYT7O43581 403 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 CHRNB1P11230 501 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 BSGP35613 385 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 PPICP45877 212 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 POU3F4P49335 361 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 TRMT12Q53H54 448 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 COX20Q5RI15 118 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 GUSBP11Q6P575 273 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 AAED1Q7RTV5 226 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ABI3BPQ7Z7G0 1075 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 SNX29P2Q8IUI4 249 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 KNL1Q8NG31 2342 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 MUCL1Q96DR8 90 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 CCDC59Q9P031 241 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 KLF13Q9Y2Y9 288 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ASB1Q9Y576 335 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNFX1Q9P2E3 1918 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 FOCADQ5VW36 1801 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 RBBP6Q7Z6E9 1792 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 A0A1B0GWA3 101 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 CSN2P05814 226 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 HERV-K104P61576 105 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 FOXC1Q12948 553 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 IL11RAQ14626 422 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF791Q3KP31 576 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 SAXO2Q658L1 398 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 FRMPD2BQ6IN97 320 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 FUNDC1Q8IVP5 155 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ALG8Q9BVK2 526 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC22A4Q9H015 551 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ANKRD19PQ9H560 264 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 LIN28AQ9H9Z2 209 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 VNN3Q9NY84 501 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 GPR160Q9UJ42 338 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 PPT2Q9UMR5 302 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 STUB1Q9UNE7 303 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 LTBP1Q14766 1721 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 WDPCPO95876 746 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 HRGP04196 525 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ZGLP1P0C6A0 271 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ENPP1P22413 925 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 CARD18P57730 90 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ECH1Q13011 328 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 NKAPLQ5M9Q1 402 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 AGAP7PQ5VUJ5 663 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 PGM2L1Q6PCE3 622 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 C3P1Q6ZMU1 363 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 MBOAT2Q6ZWT7 520 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 B3GNT7Q8NFL0 401 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 AGAP4Q96P64 663 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 NRSN2Q9GZP1 204 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 OR10A2Q9H208 303 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 PTPRZ1P23471 2315 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 DISC1C4P0D8 188 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ITGAMP11215 1152 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 MYF5P13349 255 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 AKR1D1P51857 326 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 PIGFQ07326 219 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 MZT1Q08AG7 82 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 DUSP5Q16690 384 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 PGBD2Q6P3X8 592 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 MARCH3Q86UD3 253 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 SIRT6Q8N6T7 355 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 OR5L1Q8NGL2 311 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 C12orf43Q96C57 262 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 HCAR1Q9BXC0 346 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ANKRD60Q9BZ19 345 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF696Q9H7X3 374 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 PAK1IP1Q9NWT1 392 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 YARS2Q9Y2Z4 477 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 A0A087WV62 115 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 IGHV1OR21-1A0A087WYE8 117 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 A8MVM7 634 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 F5H5K5 113 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 STMND1H3BQB6 276 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 F10P00742 488 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 CD3GP09693 182 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 MAN2A2P49641 1150 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 PUDPQ08623 228 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 RAB40BQ12829 278 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 SFTPA1Q8IWL2 248 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 CHST8Q9H2A9 424 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 FN3KQ9H479 309 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 FBXO4Q9UKT5 387 aa8.75□□□□□ -1.01
CLTCL1-208ENST00000615606 LRRN3E7EW58 273 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 MKRN2OSH3BPM6 223 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 WNT4P56705 351 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ARHGAP11BQ3KRB8 267 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SCGB2B2Q4G0G5 96 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms