RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NKX2-4Q9H2Z4 354 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 OR51J1Q9H342 316 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 FKBP14Q9NWM8 211 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 C19orf53Q9UNZ5 99 aaPredicted RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 CHD5Q8TDI0 1954 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FGF17O60258 216 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 TRIM3O75382 744 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 KRT33AO76009 404 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 APBB3O95704 486 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 UCHL1P09936 223 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 GP1BBP13224 206 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 ELK1P19419 428 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 RABIFP47224 123 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 EVX1P49640 407 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 PSMA6P60900 246 aaKnown RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 RRAS2P62070 204 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 PPP2CBP62714 309 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 PPP2CAP67775 309 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FGFBP1Q14512 234 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 ZCCHC12Q6PEW1 402 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 BAIAP2L2Q6UXY1 529 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 PLCZ1Q86YW0 608 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 OR8D4Q8NGM9 314 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 OR2T35Q8NGX2 323 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 ZDHHC1Q8WTX9 485 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 SMAP2Q8WU79 429 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 DPCDQ9BVM2 203 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 ISG20L2Q9H9L3 353 aaKnown RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 PPIEQ9UNP9 301 aaKnown RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 MYLKQ15746 1914 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 MN1Q10571 1320 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 SEC16AO15027 2179 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 SMLR1H3BR10 107 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 L7N2F9 121 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FMO6PO60774 539 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 NTN1O95631 604 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 CSN2P05814 226 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 SBK2P0C263 348 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 PXNP49023 591 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 AP2S1P53680 142 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 RUNX2Q13950 521 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 INSL4Q14641 139 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 NUP54Q7Z3B4 507 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 C17orf50Q8WW18 174 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 DIO2Q92813 273 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 GON7Q9BXV9 100 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 BARHL1Q9BZE3 327 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FN3KQ9H479 309 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 C6orf106Q9H6K1 298 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 PDE7BQ9NP56 450 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 DUSP22Q9NRW4 184 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FXYD6-FXYD2A0A087WZ82 144 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 RFXAPO00287 272 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 RBBP9O75884 186 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 ECDO95905 644 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 MT-ND4P03905 459 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 THBS1P07996 1170 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 SPARCP09486 303 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 RBMS1P29558 406 aaKnown RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 NUP62P37198 522 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 TNFRSF4P43489 277 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 NRG3P56975 720 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FAPQ12884 760 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 DUSP8Q13202 625 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 GXYLT1Q4G148 440 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 NIPAL3Q6P499 406 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 KLHL24Q6TFL4 600 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 CD300LDQ6UXZ3 194 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 TTLL10Q6ZVT0 673 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 ZNF767PQ75MW2 155 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 GLCCI1Q86VQ1 547 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 JAGN1Q8N5M9 183 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 SIMC1Q8NDZ2 872 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 ZFPM2Q8WW38 1151 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FAM3CQ92520 227 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 MED18Q9BUE0 208 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 B3GNT4Q9C0J1 378 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 FXYD6Q9H0Q3 95 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 IL20Q9NYY1 176 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 SLC17A4Q9Y2C5 497 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 PCYT1BQ9Y5K3 369 aaPredicted RBP8.05□□□□□ -1.12
LIG4-204ENST00000611712 NUBP2Q9Y5Y2 271 aa8.05□□□□□ -1.12
LIG4-204ENST00000611712 KIR2DS5A0A0G2JLQ3 304 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 A0A0G2JNG1 304 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 TVP23AA6NH52 213 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 KIR2DS3K7RE56 304 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 M0R233 179 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 SLC43A1O75387 559 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 IFNA6P05013 189 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 TRAPPC2P0DI81 140 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 TRAPPC2BP0DI82 140 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 GIMD1P0DJR0 217 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 KIR2DL3P43628 341 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 STARP49675 285 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ART1P52961 327 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 PRPS1P60891 318 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 SIRPAP78324 504 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 MAT1AQ00266 395 aaKnown RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 KIR2DS5Q14953 304 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms