RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 GCNT6Q5T4J0 391 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 PRAMEF8Q5VWM4 474 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 PRAMEF7Q5VXH5 474 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 OR2A2Q6IF42 318 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 LUZP2Q86TE4 346 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 PTOV1Q86YD1 416 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 PEX5LQ8IYB4 626 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 CGREF1Q99674 301 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 OPN3Q9H1Y3 402 aaPredicted RBP11.4□□□□□ -0.58
CD9-212ENST00000610354 THUMPD1Q9NXG2 353 aaKnown RBP11.4□□□□□ -0.58
CD9-212ENST00000610354 STOML1Q9UBI4 398 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.4□□□□□ -0.58
CD9-212ENST00000610354 POLQO75417 2590 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 TACC2O95359 2948 aa11.4□□□□□ -0.59
CD9-212ENST00000610354 PRR14LQ5THK1 2151 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 A8MXE2 369 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 FXYD1O00168 92 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 FAAHO00519 579 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 GCM2O75603 506 aaPredicted RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 THBS1P07996 1170 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 PABPC4LP0CB38 370 aaKnown RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 PPIBP23284 216 aaKnown RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 GZMMP51124 257 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 SEC24CP53992 1094 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 GYS2P54840 703 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 MTPNP58546 118 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 CDK6Q00534 326 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 CAPRIN1Q14444 709 aaKnown RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 ZNF239Q16600 458 aaKnown RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 LIN52Q52LA3 116 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 RNF220Q5VTB9 566 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 ZNF474Q6S9Z5 364 aaPredicted RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 CNEP1R1Q8N9A8 125 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 ZNF563Q8TA94 476 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 BBS10Q8TAM1 723 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 TMEM234Q8WY98 164 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 C14orf79Q96F83 325 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 SPATA9Q9BWV2 254 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 RBM24Q9BX46 236 aaKnown RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 ADAM19Q9H013 955 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 PIGMQ9H3S5 423 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 TMEM38AQ9H6F2 299 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 PAQR5Q9NXK6 330 aaPredicted RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 GALNT8Q9NY28 637 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 OSGIN1Q9UJX0 560 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 ING1Q9UK53 422 aaPredicted RBP11.39□□□□□ -0.59
CD9-212ENST00000610354 PACSIN3Q9UKS6 424 aa11.39□□□□□ -0.59
CD9-212ENST00000610354 IGHV3-15A0A0B4J1V0 119 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 CFAP73A6NFT4 308 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 ANGPT2O15123 496 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 FRS3O43559 492 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 TPST1O60507 370 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 SS18L1O75177 396 aaPredicted RBP11.38□□□□□ -0.59
CD9-212ENST00000610354 SYNGR4O95473 234 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 ENPP1P22413 925 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 APOBEC1P41238 236 aaKnown RBP11.38□□□□□ -0.59
CD9-212ENST00000610354 NFYCQ13952 458 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 PDSS1Q5T2R2 415 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 REEP3Q6NUK4 255 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 PPP4R4Q6NUP7 873 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 C3orf33Q6P1S2 294 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 ZNF771Q7L3S4 317 aaPredicted RBP11.38□□□□□ -0.59
CD9-212ENST00000610354 FAM214BQ7L5A3 538 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 GRINAQ7Z429 371 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 GDF7Q7Z4P5 450 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 SERPINA11Q86U17 422 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 ZNF610Q8N9Z0 462 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 RNF128Q8TEB7 428 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 ABHD3Q8WU67 409 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 DNAJA3Q96EY1 480 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 ARL5BQ96KC2 179 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 WFDC6Q9BQY6 131 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 SLC39A3Q9BRY0 314 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 PRRG4Q9BZD6 226 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 OR11A1Q9GZK7 315 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 CRIM1Q9NZV1 1036 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 ARMCX1Q9P291 453 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 MCTS1Q9ULC4 181 aaKnown RBP11.38□□□□□ -0.59
CD9-212ENST00000610354 ABCA4P78363 2273 aa11.38□□□□□ -0.59
CD9-212ENST00000610354 TMED7-TICAM2A0A0A6YYA0 188 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 TMEM72A0PK05 275 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 ZC3H12DA2A288 527 aaKnown RBP11.37□□□□□ -0.59
CD9-212ENST00000610354 GJE1A6NN92 205 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 EVPLLA8MZ36 301 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 MSTNO14793 375 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 SMAD9O15198 467 aaKnown RBP11.37□□□□□ -0.59
CD9-212ENST00000610354 FCGR2AP12318 317 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 ETS2P15036 469 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 CCNA2P20248 432 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 TACR3P29371 465 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 SLC1A3P43003 542 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 PCBP3P57721 371 aaKnown RBP11.37□□□□□ -0.59
CD9-212ENST00000610354 RAC3P60763 192 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 HOXC5Q00444 222 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 TLE4Q04727 773 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 FAM27E3Q08E93 113 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 SCARB2Q14108 478 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 GNA13Q14344 377 aa11.37□□□□□ -0.59
CD9-212ENST00000610354 LARS2Q15031 903 aaKnown RBP11.37□□□□□ -0.59
CD9-212ENST00000610354 SYT14P1Q58G82 188 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms