RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 FESP07332 822 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 VIMP08670 466 aaKnown RBP12.93□□□□□ -0.34
HDDC2-204ENST00000608295 PRG2P13727 222 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 NID1P14543 1247 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 ADH6P28332 368 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 AQP1P29972 269 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 HOXC5Q00444 222 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 SORDQ00796 357 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 GUSBP1Q15486 140 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 TSC22D1Q15714 1073 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 LIN52Q52LA3 116 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 SLC25A53Q5H9E4 307 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 GCNT6Q5T4J0 391 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 NUFIP2Q7Z417 695 aaKnown RBP12.93□□□□□ -0.34
HDDC2-204ENST00000608295 TUSC5Q8IXB3 177 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 ZNF300Q96RE9 604 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-204ENST00000608295 MED18Q9BUE0 208 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 IKZF5Q9H5V7 419 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 CACYBPQ9HB71 228 aaKnown RBP12.93□□□□□ -0.34
HDDC2-204ENST00000608295 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 TIGARQ9NQ88 270 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 SERINC1Q9NRX5 453 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 PAQR5Q9NXK6 330 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-204ENST00000608295 KLHL13Q9P2N7 655 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 CCDC168Q8NDH2 2452 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 DSPPQ9NZW4 1301 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 HRNRQ86YZ3 2850 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-204ENST00000608295 SULT2B1O00204 365 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 SMAD9O15198 467 aaKnown RBP12.92□□□□□ -0.34
HDDC2-204ENST00000608295 TACC2O95359 2948 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 TFPTP0C1Z6 253 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 EPXP11678 715 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 PTNP21246 168 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 TACR3P29371 465 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 MRPL19P49406 292 aaKnown RBP12.92□□□□□ -0.34
HDDC2-204ENST00000608295 DIO1P49895 249 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 ATP4BP51164 291 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 MTPNP58546 118 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
HDDC2-204ENST00000608295 GNA13Q14344 377 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 TMEM201Q5SNT2 666 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 CGB2Q6NT52 195 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 GRINAQ7Z429 371 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 DHDDSQ86SQ9 333 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 CDC20BQ86Y33 519 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 CLIP4Q8N3C7 705 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 OR6K3Q8NGY3 331 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 ARL5BQ96KC2 179 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 CCDC106Q9BWC9 280 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 ZNF385DQ9H6B1 395 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 MTHFD2LQ9H903 347 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-204ENST00000608295 SLC52A3Q9NQ40 469 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
HDDC2-204ENST00000608295 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 CHRNA9Q9UGM1 479 aa12.92□□□□□ -0.34
HDDC2-204ENST00000608295 TMED7-TICAM2A0A0A6YYA0 188 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
HDDC2-204ENST00000608295 CFAP73A6NFT4 308 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 ANGPT2O15123 496 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 TROVE2P10155 538 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDDC2-204ENST00000608295 CD8BP10966 210 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 UGT2B10P36537 528 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 PEX19P40855 299 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 OR2B6P58173 313 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 TXNL4AP83876 142 aaKnown RBP12.91□□□□□ -0.34
HDDC2-204ENST00000608295 EPS8Q12929 822 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 BNIP2Q12982 314 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 SELPLGQ14242 412 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 CAPRIN1Q14444 709 aaKnown RBP12.91□□□□□ -0.34
HDDC2-204ENST00000608295 LRIF1Q5T3J3 769 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 SERPINA11Q86U17 422 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 RETREG3Q86VR2 466 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 WFIKKN1Q96NZ8 548 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 CPPED1Q9BRF8 314 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-204ENST00000608295 SLC39A3Q9BRY0 314 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 RAD21L1Q9H4I0 556 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 A4GALTQ9NPC4 353 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 CALML5Q9NZT1 146 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 LEF1Q9UJU2 399 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-204ENST00000608295 TRIM33Q9UPN9 1127 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 PLEKHA6Q9Y2H5 1048 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 TMED7Q9Y3B3 224 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 TESMINQ9Y4I5 508 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-204ENST00000608295 SPG11Q96JI7 2443 aa12.91□□□□□ -0.34
HDDC2-204ENST00000608295 CDHR4A6H8M9 788 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 ETV2O00321 342 aaPredicted RBP12.9□□□□□ -0.34
HDDC2-204ENST00000608295 CASKO14936 926 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 DNAJA2O60884 412 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 RAMP1O60894 148 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 IGHV3-9P01782 118 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 GUSBP08236 651 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 EDNRAP25101 427 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 FADDQ13158 208 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 NFYCQ13952 458 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
HDDC2-204ENST00000608295 ZNF311Q5JNZ3 666 aa12.9□□□□□ -0.34
HDDC2-204ENST00000608295 EEF1A1P5Q5VTE0 462 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms