RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 COPZ1P61923 177 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 LSM11P83369 360 aaKnown RBP eCLIP9.27□□□□□ -0.93
ITGB5-211ENST00000608107 PPP1R8Q12972 351 aaKnown RBP9.27□□□□□ -0.93
ITGB5-211ENST00000608107 ALG10BQ5I7T1 473 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 FAM180AQ6UWF9 173 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 ATG4DQ86TL0 474 aaPredicted RBP9.27□□□□□ -0.93
ITGB5-211ENST00000608107 P3H2Q8IVL5 708 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 NKAIN4Q8IVV8 208 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 GTPBP8Q8N3Z3 284 aaPredicted RBP9.27□□□□□ -0.93
ITGB5-211ENST00000608107 NEIL3Q8TAT5 605 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 FAR1Q8WVX9 515 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 TMEM234Q8WY98 164 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 ST8SIA1Q92185 356 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 SMPDL3BQ92485 455 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 NR4A3Q92570 626 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 DUS3LQ96G46 650 aaKnown RBP9.27□□□□□ -0.93
ITGB5-211ENST00000608107 SLC41A3Q96GZ6 507 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 PRRC1Q96M27 445 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 PRSS27Q9BQR3 290 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 TRIM2Q9C040 744 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 EXO5Q9H790 373 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 TMEM185BQ9H7F4 350 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 EVA1AQ9H8M9 152 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 HHATLQ9HCP6 504 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 ACKR4Q9NPB9 350 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 QPCTLQ9NXS2 382 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 SPRR3Q9UBC9 169 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 RPS6KB2Q9UBS0 482 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 RALYQ9UKM9 306 aaKnown RBP9.27□□□□□ -0.93
ITGB5-211ENST00000608107 TMED7Q9Y3B3 224 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 MRPS18CQ9Y3D5 142 aaKnown RBP9.27□□□□□ -0.93
ITGB5-211ENST00000608107 ZNF337Q9Y3M9 751 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 TESMINQ9Y4I5 508 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 BSNQ9UPA5 3926 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 NBASA2RRP1 2371 aa9.27□□□□□ -0.93
ITGB5-211ENST00000608107 IGKV1D-42A0A075B6H8 117 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 A0A0B4J2E0 115 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 A0A1B0GX12 115 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 TMEM72A0PK05 275 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ZC3H12DA2A288 527 aaKnown RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 TTLL8A6PVC2 850 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 H0YC42 278 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 H3BML4 177 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ETV2O00321 342 aaPredicted RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 KRT36O76013 467 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 OR5F1O95221 314 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 IGHG3P01860 377 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 CRYABP02511 175 aaKnown RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 BMP7P18075 431 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 RHCEP18577 417 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 RRM2P31350 389 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 TDGF1P3P51864 188 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 IST1P53990 364 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 TPD52P55327 224 aaPredicted RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 GFRA1P56159 465 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 DLX5P56178 289 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ELF3P78545 371 aaPredicted RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 SPIBQ01892 262 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 C19orf57Q0VDD7 668 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 C3AR1Q16581 482 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 C1QL3Q5VWW1 255 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 HMBOX1Q6NT76 420 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ZNF613Q6PF04 617 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 TBPL2Q6SJ96 375 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 PIWIL3Q7Z3Z3 882 aaKnown RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 GRINAQ7Z429 371 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 FGD2Q7Z6J4 655 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 AMIGO2Q86SJ2 522 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ZNF605Q86T29 641 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 MEX3DQ86XN8 651 aaKnown RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 CHERPQ8IWX8 916 aaKnown RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 OFCC1Q8IZS5 231 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 PIK3C3Q8NEB9 887 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 OR52J3Q8NH60 311 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 SLC38A4Q969I6 547 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ZBTB8AQ96BR9 441 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 MRGPRX4Q96LA9 322 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 SFXN2Q96NB2 322 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 PIP5K1AQ99755 562 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 FNDC11Q9BVV2 318 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 OR11A1Q9GZK7 315 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 LDAHQ9H6V9 325 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 MAN2C1Q9NTJ4 1040 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ACAD8Q9UKU7 415 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 FAM32AQ9Y421 112 aaKnown RBP9.26□□□□□ -0.93
ITGB5-211ENST00000608107 AP4S1Q9Y587 144 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 MED12LQ86YW9 2145 aa9.26□□□□□ -0.93
ITGB5-211ENST00000608107 ARHGAP21Q5T5U3 1957 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 A0A087WUJ7 227 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 A0A1B0GTH9 108 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 A0A1W2PNR3 127 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 C7orf72A4D263 438 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 ELOA3DA6NLF2 546 aaPredicted RBP9.25□□□□□ -0.93
ITGB5-211ENST00000608107 CHP2O43745 196 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 SUSD5O60279 629 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 PIP5K1CO60331 668 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 UQCRBP14927 111 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 CXCR1P25024 350 aa9.25□□□□□ -0.93
ITGB5-211ENST00000608107 SFTPDP35247 375 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms