RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 FUT5Q11128 374 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 LIN52Q52LA3 116 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 MAVSQ7Z434 540 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 STEAP2Q8NFT2 490 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 ABHD3Q8WU67 409 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 VPS33AQ96AX1 596 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 SRXN1Q9BYN0 137 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 QRSL1Q9H0R6 528 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 OR10A4Q9H209 315 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 SLC38A1Q9H2H9 487 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 TMEM45AQ9NWC5 275 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 EMC3Q9P0I2 261 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 PLEKHA6Q9Y2H5 1048 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 A0A1W2PNR3 127 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 CFAP73A6NFT4 308 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 C5orf58C9J3I9 102 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 DNPH1O43598 174 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 CHRM4P08173 479 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 NID1P14543 1247 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 PPIBP23284 216 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 DIO1P49895 249 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 IDH3AP50213 366 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 NR1H2P55055 460 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 RASGEF1BQ0VAM2 473 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 FADDQ13158 208 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 TESK1Q15569 626 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 COX20Q5RI15 118 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 TMPPEQ6ZT21 453 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 DDIT4LQ96D03 193 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 ZG16BQ96DA0 208 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 PIK3IP1Q96FE7 263 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 ALPK1Q96QP1 1244 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 COQ10BQ9H8M1 238 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 SLCO1B3Q9NPD5 702 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 NGBQ9NPG2 151 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 C6orf203Q9P0P8 240 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 TRIM33Q9UPN9 1127 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 OTOGQ6ZRI0 2925 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 CSMD2Q7Z408 3487 aa12.85□□□□□ -0.35
PKNOX1-210ENST00000607049 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 HNRNPCL2B2RXH8 293 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 CLIC1O00299 241 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 HNRNPCL1O60812 293 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 BCHEP06276 602 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 ETFAP13804 333 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 PSMB1P20618 241 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 FPR1P21462 350 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 IL32P24001 234 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 SLC1A3P43003 542 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 POLR2HP52434 150 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 P2RY6Q15077 328 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 BEX5Q5H9J7 111 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 ANKRD34AQ69YU3 496 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 ZNF550Q7Z398 422 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 HMGN2P46Q86SG4 172 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 MTDHQ86UE4 582 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 OR9I1Q8NGQ6 314 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 OR52P1PQ8NH57 321 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 CNOT9Q92600 299 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 SPDL1Q96EA4 605 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 MAGEB18Q96M61 343 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 CCDC106Q9BWC9 280 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 ACTR6Q9GZN1 396 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 BCO1Q9HAY6 547 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 CTPS2Q9NRF8 586 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 CCDC167Q9P0B6 97 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 CORO2BQ9UQ03 480 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 IFT52Q9Y366 437 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 MPDZO75970 2070 aa12.84□□□□□ -0.35
PKNOX1-210ENST00000607049 PCNX3Q9H6A9 2034 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 A0A096LPI6 279 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 TMED7-TICAM2A0A0A6YYA0 188 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 IGHV3-15A0A0B4J1V0 119 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 PRAMEF27A3QJZ7 478 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 ZNF724A8MTY0 619 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 NR5A2O00482 541 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 FAAHO00519 579 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 GPR171O14626 319 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 ZNF208O43345 1280 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 EIF1BO60739 113 aaKnown RBP12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 CYTIPO60759 359 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 PMS2P2O95744 297 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 FESP07332 822 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 THBS1P07996 1170 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 TFPTP0C1Z6 253 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 NCF2P19878 526 aaPredicted RBP12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 CXCR1P25024 350 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 ATP4BP51164 291 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms