RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SYT14P1Q58G82 188 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 BEX5Q5H9J7 111 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 COX20Q5RI15 118 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 MSANTD1Q6ZTZ1 278 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 NUFIP2Q7Z417 695 aaKnown RBP16.12■□□□□ 0.17
CCDC12-208ENST00000603885 GRINAQ7Z429 371 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 CMIPQ8IY22 773 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 OR52B2Q96RD2 323 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 CCDC106Q9BWC9 280 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 RMND5AQ9H871 391 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 BCO1Q9HAY6 547 aa16.12■□□□□ 0.17
CCDC12-208ENST00000603885 FLNAP21333 2647 aaKnown RBP16.11■□□□□ 0.17
CCDC12-208ENST00000603885 AGAP5A6NIR3 686 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 CLDN24A6NM45 220 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 SMAD9O15198 467 aaKnown RBP16.11■□□□□ 0.17
CCDC12-208ENST00000603885 ANP32DO95626 131 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 TFPIP10646 304 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 DIO1P49895 249 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 CSNK2A1P68400 391 aaPredicted RBP16.11■□□□□ 0.17
CCDC12-208ENST00000603885 ADAM8P78325 824 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 RASGEF1BQ0VAM2 473 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 TMPPEQ6ZT21 453 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 GABRG1Q8N1C3 465 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 MIER2Q8N344 545 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 STEAP2Q8NFT2 490 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 WDR60Q8WVS4 1066 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 PMM1Q92871 262 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 HS3ST6Q96QI5 342 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 PSD2Q9BQI7 771 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 HDHD5Q9BXW7 423 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 MTHFD2LQ9H903 347 aaPredicted RBP16.11■□□□□ 0.17
CCDC12-208ENST00000603885 UBTD1Q9HAC8 227 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 CTPS2Q9NRF8 586 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 CHRNA9Q9UGM1 479 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 USH1CQ9Y6N9 552 aa16.11■□□□□ 0.17
CCDC12-208ENST00000603885 ZNF469Q96JG9 3925 aaPredicted RBP16.11■□□□□ 0.17
CCDC12-208ENST00000603885 ACANP16112 2415 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 SULT2B1O00204 365 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 CYTIPO60759 359 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 GCM2O75603 506 aaPredicted RBP16.1■□□□□ 0.17
CCDC12-208ENST00000603885 FESP07332 822 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 ZCCHC18P0CG32 403 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 IL7RP16871 459 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 FPR1P21462 350 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 FKBP2P26885 142 aaKnown RBP16.1■□□□□ 0.17
CCDC12-208ENST00000603885 LOXP28300 417 aaPredicted RBP16.1■□□□□ 0.17
CCDC12-208ENST00000603885 POLR2JP52435 117 aaKnown RBP16.1■□□□□ 0.17
CCDC12-208ENST00000603885 PLAURQ03405 335 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 FOXD4Q12950 439 aaPredicted RBP16.1■□□□□ 0.17
CCDC12-208ENST00000603885 CXorf67Q86X51 503 aaPredicted RBP16.1■□□□□ 0.17
CCDC12-208ENST00000603885 WFDC8Q8IUA0 241 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 OR9I1Q8NGQ6 314 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 CNOT9Q92600 299 aaKnown RBP16.1■□□□□ 0.17
CCDC12-208ENST00000603885 PIGTQ969N2 578 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 ITCHQ96J02 903 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 C7orf26Q96N11 449 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 SLC6A13Q9NSD5 602 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 P2RX2Q9UBL9 471 aa16.1■□□□□ 0.17
CCDC12-208ENST00000603885 VPS13CQ709C8 3753 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.09■□□□□ 0.17
CCDC12-208ENST00000603885 KLF4O43474 513 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 DBIP07108 87 aaKnown RBP16.09■□□□□ 0.17
CCDC12-208ENST00000603885 UQCRBP14927 111 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 RPS4Y1P22090 263 aaKnown RBP16.09■□□□□ 0.17
CCDC12-208ENST00000603885 IL32P24001 234 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 CRATP43155 626 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 HTR3AP46098 478 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 IDH2P48735 452 aaKnown RBP16.09■□□□□ 0.17
CCDC12-208ENST00000603885 NR1H2P55055 460 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 STX1BP61266 288 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 ACKR1Q16570 336 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 C6orf10Q5SRN2 563 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 EPGNQ6UW88 154 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 C20orf204Q6ZNR8 217 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 PEX5LQ8IYB4 626 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 LRRC8CQ8TDW0 803 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 S100PBPQ96BU1 408 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 ZHX1-C8orf76Q96EF9 292 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 ATP6V1G3Q96LB4 118 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 TPT1P8Q9HAU6 139 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 CALML5Q9NZT1 146 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 ING1Q9UK53 422 aaPredicted RBP16.09■□□□□ 0.17
CCDC12-208ENST00000603885 HDGFL3Q9Y3E1 203 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 FREM1Q5H8C1 2179 aa16.09■□□□□ 0.17
CCDC12-208ENST00000603885 FAM234BA2RU67 622 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 ZNF724A8MTY0 619 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 AP3D1O14617 1153 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
CCDC12-208ENST00000603885 ADAM11O75078 769 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 TGDSO95455 350 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 OR3A2P47893 321 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 CLK1P49759 484 aaKnown RBP16.08■□□□□ 0.16
CCDC12-208ENST00000603885 MVDP53602 400 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 DSTNP60981 165 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 P2RY6Q15077 328 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 SFRP5Q5T4F7 317 aa16.08■□□□□ 0.16
CCDC12-208ENST00000603885 MRPL2Q5T653 305 aaKnown RBP16.08■□□□□ 0.16
CCDC12-208ENST00000603885 MTDHQ86UE4 582 aaKnown RBP16.08■□□□□ 0.16
CCDC12-208ENST00000603885 KISS1RQ969F8 398 aaPredicted RBP16.08■□□□□ 0.16
CCDC12-208ENST00000603885 VPS33AQ96AX1 596 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms