RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 OR10G3Q8NGC4 313 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 DUSP19Q8WTR2 217 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 TMEM234Q8WY98 164 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 PSMF1Q92530 271 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 GPA33Q99795 319 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 ANGPTL4Q9BY76 406 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 METTL7AQ9H8H3 244 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 SLC25A19Q9HC21 320 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 IL20Q9NYY1 176 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 TEKT2Q9UIF3 430 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 MYRFQ9Y2G1 1151 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 WIF1Q9Y5W5 379 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 ZFYVE26Q68DK2 2539 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 ATRXP46100 2492 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 CLIC3O95833 236 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 GP1BBP13224 206 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 LIFP15018 202 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 MST1P26927 711 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 EPHA2P29317 976 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 SLC9A3P48764 834 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 RRADP55042 308 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 TPD52P55327 224 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 CDC42P60953 191 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 CSNK2BP67870 215 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 LSM11P83369 360 aaKnown RBP eCLIP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 CDK5Q00535 292 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 SLC25A53Q5H9E4 307 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 ACER2Q5QJU3 275 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 BROXQ5VW32 411 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 C5orf46Q6UWT4 87 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 RTL4Q6ZR62 310 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 GRINAQ7Z429 371 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 TMEM156Q8N614 296 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 ZNF563Q8TA94 476 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 TRUB1Q8WWH5 349 aaKnown RBP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 HDAC2Q92769 488 aaKnown RBP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 OSTF1Q92882 214 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 ZNF566Q969W8 418 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 BPIFA2Q96DR5 249 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 FAM46AQ96IP4 442 aaKnown RBP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 LHPPQ9H008 270 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 ING2Q9H160 280 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 MEPEQ9NQ76 525 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 HPF1Q9NWY4 346 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 TAS2R10Q9NYW0 307 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
ZNF548-212ENST00000602086 MRPS18BQ9Y676 258 aaKnown RBP13.1□□□□□ -0.31
ZNF548-212ENST00000602086 ELOA3DA6NLF2 546 aaPredicted RBP13.09□□□□□ -0.31
ZNF548-212ENST00000602086 RCBTB2O95199 551 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 CCDC159P0C7I6 412 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 IFI30P13284 250 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 ITPKBP27987 946 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 GIPRP48546 466 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 HLCSP50747 726 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 CCR4P51679 360 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 POLR2HP52434 150 aaKnown RBP13.09□□□□□ -0.31
ZNF548-212ENST00000602086 CD47Q08722 323 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
ZNF548-212ENST00000602086 QPRTQ15274 297 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 TBC1D25Q3MII6 688 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 ELOA3BQ3SY89 546 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 ANKDD1AQ495B1 522 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 C6orf141Q5SZD1 244 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 SLC22A10Q63ZE4 541 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 C12orf73Q69YU5 71 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 IL20RBQ6UXL0 311 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 FADS6Q8N9I5 356 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 ELOA3Q8NG57 546 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 RHOXF1Q8NHV9 184 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 BRIX1Q8TDN6 353 aaKnown RBP13.09□□□□□ -0.31
ZNF548-212ENST00000602086 DOCK10Q96BY6 2186 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 SH3YL1Q96HL8 342 aaPredicted RBP13.09□□□□□ -0.31
ZNF548-212ENST00000602086 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
ZNF548-212ENST00000602086 PPP4R1LQ9P1A2 415 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 ABI3Q9P2A4 366 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 SCOCQ9UIL1 159 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 PCDHGB5Q9Y5G0 923 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
ZNF548-212ENST00000602086 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 IGKV1D-42A0A075B6H8 117 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 A0A087WZY1 265 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 UNC119BA6NIH7 251 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 MAN1A2O60476 641 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 SNX4O95219 450 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 TACR3P29371 465 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 SMSP52788 366 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 FOXD4Q12950 439 aaPredicted RBP13.08□□□□□ -0.32
ZNF548-212ENST00000602086 CDK5R2Q13319 367 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 BLMHQ13867 455 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 SLC25A30Q5SVS4 291 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
ZNF548-212ENST00000602086 CLEC1AQ8NC01 280 aa13.08□□□□□ -0.32
ZNF548-212ENST00000602086 OR6S1Q8NH40 331 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms