RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MEPEQ9NQ76 525 aaPredicted RBP16.39■□□□□ 0.21
VRK3-225ENST00000601912 C20orf141Q9NUB4 165 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 MED11Q9P086 117 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 ZAR1LA6NP61 321 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 MST1P26927 711 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 CYB561P49447 251 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 HLCSP50747 726 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 CDC42P60953 191 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 MYBPC1Q00872 1141 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 CRYZQ08257 329 aaKnown RBP16.38■□□□□ 0.21
VRK3-225ENST00000601912 PRAMEF20Q5VT98 475 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 GRINAQ7Z429 371 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 CYP4Z2PQ8N1L4 340 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 BEST3Q8N1M1 668 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 TEX47Q8TBZ9 253 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 ST8SIA1Q92185 356 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 TMEM43Q9BTV4 400 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 ANGPTL4Q9BY76 406 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 DPH1Q9BZG8 443 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 SH2D2AQ9NP31 389 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 MYRFQ9Y2G1 1151 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 PCDHGB6Q9Y5F9 930 aa16.38■□□□□ 0.21
VRK3-225ENST00000601912 ANKRD33BA6NCL7 494 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 UNC119BA6NIH7 251 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 EFCAB9A8MZ26 197 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 CCL3P10147 92 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 SAGP10523 405 aaPredicted RBP16.37■□□□□ 0.21
VRK3-225ENST00000601912 MAKP20794 623 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 CASRP41180 1078 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 POLR2HP52434 150 aaKnown RBP16.37■□□□□ 0.21
VRK3-225ENST00000601912 FAM81AQ8TBF8 368 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 OSTF1Q92882 214 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 FRMD6Q96NE9 622 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 KLHDC3Q9BQ90 382 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 YTHDF1Q9BYJ9 559 aaKnown RBP16.37■□□□□ 0.21
VRK3-225ENST00000601912 PTGES2Q9H7Z7 377 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 IMPAD1Q9NX62 359 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 OSGIN1Q9UJX0 560 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 KLK13Q9UKR3 277 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 FAM47E-STBD1D6RA91 191 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 CDC42EP2O14613 210 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 SNX4O95219 450 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 P04436 131 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 TP53P04637 393 aaPredicted RBP16.37■□□□□ 0.21
VRK3-225ENST00000601912 ZNF41P51814 821 aaPredicted RBP16.37■□□□□ 0.21
VRK3-225ENST00000601912 OC90Q02509 493 aaPredicted RBP16.37■□□□□ 0.21
VRK3-225ENST00000601912 CD47Q08722 323 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 CLN3Q13286 438 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 ATP1A1-AS1Q5TC04 95 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 ZNF468Q5VIY5 522 aaPredicted RBP16.37■□□□□ 0.21
VRK3-225ENST00000601912 P3H2Q8IVL5 708 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 CLDN22Q8N7P3 220 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 OR4K17Q8NGC6 315 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 ZNF524Q96C55 264 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 SGTBQ96EQ0 304 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 TEX12Q9BXU0 123 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 DSN1Q9H410 356 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 ANKRD10Q9NXR5 420 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 SCOCQ9UIL1 159 aa16.37■□□□□ 0.21
VRK3-225ENST00000601912 ARGFXA6NJG6 315 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 ENO4A6NNW6 628 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 NKX2-8O15522 239 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 SLC25A12O75746 678 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 IGF2P01344 180 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 IGFBP1P08833 259 aaPredicted RBP16.36■□□□□ 0.21
VRK3-225ENST00000601912 PRKAR1AP10644 381 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 GIPRP48546 466 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 SMSP52788 366 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 BROXQ5VW32 411 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 SLX4IPQ5VYV7 408 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 TMEM236Q5W0B7 351 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 RPL13AP3Q6NVV1 102 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 ISLR2Q6UXK2 745 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 CASP12Q6UXS9 341 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 ZNF620Q6ZNG0 422 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 KIF18BQ86Y91 864 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 GALNT16Q8N428 558 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 EGLN3Q9H6Z9 239 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 ZNF696Q9H7X3 374 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 SACM1LQ9NTJ5 587 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 IL20Q9NYY1 176 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 CDH10Q9Y6N8 788 aa16.36■□□□□ 0.21
VRK3-225ENST00000601912 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 TMED7-TICAM2A0A0A6YYA0 188 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 MPZL2O60487 215 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 RCBTB2O95199 551 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 PRKCAP17252 672 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 BMP7P18075 431 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 MASP1P48740 699 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 CDK5R2Q13319 367 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 GINS1Q14691 196 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 MAD2L1BPQ15013 274 aaPredicted RBP16.35■□□□□ 0.21
VRK3-225ENST00000601912 CRTC2Q53ET0 693 aaPredicted RBP16.35■□□□□ 0.21
VRK3-225ENST00000601912 SLC27A4Q6P1M0 643 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 POMZP3Q6PJE2 187 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 OAFQ86UD1 273 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 PLCZ1Q86YW0 608 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 CCDC71Q8IV32 467 aaPredicted RBP16.35■□□□□ 0.21
VRK3-225ENST00000601912 OR2M3Q8NG83 312 aa16.35■□□□□ 0.21
VRK3-225ENST00000601912 FBLIM1Q8WUP2 373 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms