RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 RABEP2Q9H5N1 569 aa16.69■□□□□ 0.26
PNKP-213ENST00000599543 BTNL2Q9UIR0 455 aa16.69■□□□□ 0.26
PNKP-213ENST00000599543 DUXAA6NLW8 204 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 NPIPB9F8W1W9 429 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 EFNA2O43921 213 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 PRKD3O94806 890 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 MATN1P21941 496 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 UQCRC2P22695 453 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 CHI3L1P36222 383 aaPredicted RBP16.68■□□□□ 0.26
PNKP-213ENST00000599543 ARFIP2P53365 341 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 SEC24CP53992 1094 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 CBFBQ13951 182 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 PDZK1Q5T2W1 519 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 ALKBH2Q6NS38 261 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 TNFAIP8L2Q6P589 184 aaPredicted RBP16.68■□□□□ 0.26
PNKP-213ENST00000599543 TFAP2EQ6VUC0 442 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 TUSC5Q8IXB3 177 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 STEAP2Q8NFT2 490 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 OR5W2Q8NH69 310 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 RAB8BQ92930 207 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 COX4I2Q96KJ9 171 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 SDF2Q99470 211 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 TACO1Q9BSH4 297 aaKnown RBP16.68■□□□□ 0.26
PNKP-213ENST00000599543 NMUR2Q9GZQ4 415 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 OR51I1Q9H343 314 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 GP6Q9HCN6 339 aa16.68■□□□□ 0.26
PNKP-213ENST00000599543 H7C1Q1 480 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 RFXANKO14593 260 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 EIF4E2O60573 245 aaKnown RBP16.67■□□□□ 0.26
PNKP-213ENST00000599543 AK1P00568 194 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 IL6P05231 212 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 HEXAP06865 529 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 NID1P14543 1247 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 IL32P24001 234 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 SQLEQ14534 574 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 QPRTQ15274 297 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 GPR68Q15743 365 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 C6orf10Q5SRN2 563 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 SLC43A2Q8N370 569 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 TMEM171Q8WVE6 324 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 S100PBPQ96BU1 408 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 AURKBQ96GD4 344 aaPredicted RBP16.67■□□□□ 0.26
PNKP-213ENST00000599543 BDH2Q9BUT1 245 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 HDHD5Q9BXW7 423 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 GSX2Q9BZM3 304 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 ZNF385DQ9H6B1 395 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 COQ10BQ9H8M1 238 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 FN1P02751 2386 aaKnown RBP16.67■□□□□ 0.26
PNKP-213ENST00000599543 CSPG4Q6UVK1 2322 aa16.67■□□□□ 0.26
PNKP-213ENST00000599543 SERINC4A6NH21 518 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 STX11O75558 287 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 CYP7B1O75881 506 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 NTN1O95631 604 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 OR12D1P0DN82 309 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 PTH2RP49190 550 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 COX20Q5RI15 118 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 SAXO2Q658L1 398 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 C3orf33Q6P1S2 294 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 BLOC1S3Q6QNY0 202 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 C16orf62Q7Z3J2 963 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 NUFIP2Q7Z417 695 aaKnown RBP16.66■□□□□ 0.26
PNKP-213ENST00000599543 RNF130Q86XS8 419 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 GABRG1Q8N1C3 465 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 SPDL1Q96EA4 605 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 ARSGQ96EG1 525 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 ITCHQ96J02 903 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 CXorf56Q9H5V9 222 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 KLHL9Q9P2J3 617 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 JMJD1CQ15652 2540 aa16.66■□□□□ 0.26
PNKP-213ENST00000599543 HIVEP2P31629 2446 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 IGHV3-15A0A0B4J1V0 119 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 HS3ST1O14792 307 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 GCM2O75603 506 aaPredicted RBP16.65■□□□□ 0.26
PNKP-213ENST00000599543 ANP32DO95626 131 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 PLAUP00749 431 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 YES1P07947 543 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 ENPP1P22413 925 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 MRPL19P49406 292 aaKnown RBP16.65■□□□□ 0.26
PNKP-213ENST00000599543 ATP4BP51164 291 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 RAC3P60763 192 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 GNGT1P63211 74 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 SKP2Q13309 424 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 SLC25A53Q5H9E4 307 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 PAGE3Q5JUK9 113 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 HMGN2P46Q86SG4 172 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 CIARTQ8N365 385 aaPredicted RBP16.65■□□□□ 0.26
PNKP-213ENST00000599543 KISS1RQ969F8 398 aaPredicted RBP16.65■□□□□ 0.26
PNKP-213ENST00000599543 SIKE1Q9BRV8 207 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 SLC52A3Q9NQ40 469 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 EXD2Q9NVH0 621 aa16.65■□□□□ 0.26
PNKP-213ENST00000599543 CADP27708 2225 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 A0A1W2PNR3 127 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 TRIM64A6NGJ6 449 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 TRIM64BA6NI03 449 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 ETV2O00321 342 aaPredicted RBP16.64■□□□□ 0.25
PNKP-213ENST00000599543 SMAD7O15105 426 aaKnown RBP16.64■□□□□ 0.25
PNKP-213ENST00000599543 CSTAP01040 98 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 TSC22D1Q15714 1073 aa16.64■□□□□ 0.25
PNKP-213ENST00000599543 ZNF141Q15928 474 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms